RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR8K1Q8NGG5 319 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 NACC1Q96RE7 527 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 SPATC1LQ9H0A9 340 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 DBR1Q9UK59 544 aaKnown RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 NPHP3-ACAD11A0A0J9YXS1 232 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 CTIFO43310 598 aaKnown RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 KCNA4P22459 653 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ZNF131P52739 623 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 HERVK_113P62684 666 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 BMT2Q1RMZ1 405 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 EAPPQ56P03 285 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 RINT1Q6NUQ1 792 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 TBC1D7Q9P0N9 293 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 DNAI1Q9UI46 699 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 CAPN11Q9UMQ6 739 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 PLXNB2O15031 1838 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 TTC26A0AVF1 554 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 SPATA31C2B4DYI2 1134 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 CHMP2AO43633 222 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 SLC25A27O95847 323 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 POTEJP0CG39 1038 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 KCNA2P16389 499 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 CACNB1Q02641 598 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 SYCP1Q15431 976 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 MAN2A1Q16706 1144 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 VWA3BQ502W6 1294 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ZNF746Q6NUN9 644 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 RAD9BQ6WBX8 426 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 GLIS3Q8NEA6 775 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ERGIC2Q96RQ1 377 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 REEP2Q9BRK0 252 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 DESI2Q9BSY9 194 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ADGRG1Q9Y653 693 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 PLXNA1Q9UIW2 1896 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ZNF236Q9UL36 1845 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 TRAF5O00463 557 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ATP9AO75110 1047 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 TBCAO75347 108 aaKnown RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 GNA14O95837 355 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 SFNP31947 248 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 JAK3P52333 1124 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 KRT76Q01546 638 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 SNAPC2Q13487 334 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 MTF1Q14872 753 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 MIIPQ5JXC2 388 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 NLRX1Q86UT6 975 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 TPH2Q8IWU9 490 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 GTF3C2Q8WUA4 911 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 ZFP91Q96JP5 570 aaPredicted RBP10.11□□□□□ -0.79
PDPN-201ENST00000294489 RUSC1Q9BVN2 902 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 KCTD10Q9H3F6 313 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 NDST4Q9H3R1 872 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 OLFML3Q9NRN5 406 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 RBPJLQ9UBG7 517 aa10.11□□□□□ -0.79
PDPN-201ENST00000294489 GAP43P17677 238 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 GUCY2CP25092 1073 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 TRIM65Q6PJ69 517 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 PPP4R3CPQ6ZMV5 832 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 LRRC55Q6ZSA7 311 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 MIER3Q7Z3K6 550 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 FAM133AQ8N9E0 248 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 CDHR1Q96JP9 859 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 CEP63Q96MT8 703 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 LXNQ9BS40 222 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 ZNHIT6Q9NWK9 470 aaKnown RBP10.1□□□□□ -0.79
PDPN-201ENST00000294489 COL4A3BPQ9Y5P4 624 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 DNAJC25-GNG10A0A024R161 153 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 CCNE2O96020 404 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 OSBPP22059 807 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 CCDC40Q4G0X9 1142 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 FIGNQ5HY92 759 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 C4orf19Q8IY42 314 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 SHCBP1Q8NEM2 672 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
PDPN-201ENST00000294489 FGFBP2Q9BYJ0 223 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 ODF2LQ9ULJ1 636 aa10.1□□□□□ -0.79
PDPN-201ENST00000294489 LOC102724159A0A0B4J2E5 919 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 RNF225M0QZC1 329 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 MYCLP12524 364 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 GNG11P61952 73 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 IRX3P78415 501 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 PWP2Q15269 919 aaKnown RBP10.09□□□□□ -0.79
PDPN-201ENST00000294489 MORC4Q8TE76 937 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 SCFD1Q8WVM8 642 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 FIZ1Q96SL8 496 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 STRA6Q9BX79 667 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 TXNRD2Q9NNW7 524 aa10.09□□□□□ -0.79
PDPN-201ENST00000294489 SIP14410 1827 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms