RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 EPC2Q52LR7 807 aa28.72■■■□□ 2.19
U2AF1-201ENST00000291552 TSHZ1Q6ZSZ6 1077 aa28.72■■■□□ 2.19
U2AF1-201ENST00000291552 REXO1Q8N1G1 1221 aaKnown RBP28.72■■■□□ 2.19
U2AF1-201ENST00000291552 POTEB3A0JP26 581 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 PDIA3P30101 505 aaKnown RBP28.71■■■□□ 2.19
U2AF1-201ENST00000291552 TOB2Q14106 344 aaPredicted RBP28.71■■■□□ 2.19
U2AF1-201ENST00000291552 AAK1Q2M2I8 961 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 POTEBQ6S5H4 581 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 IL27Q8NEV9 243 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 HLA-CQ95604 372 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 C6orf50Q9HD87 102 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 PCDHA2Q9Y5H9 948 aa28.71■■■□□ 2.19
U2AF1-201ENST00000291552 LINC00271P0C7V0 271 aa28.7■■■□□ 2.18
U2AF1-201ENST00000291552 IFNAR1P17181 557 aa28.7■■■□□ 2.18
U2AF1-201ENST00000291552 CD52P31358 61 aa28.7■■■□□ 2.18
U2AF1-201ENST00000291552 TMEM62Q0P6H9 643 aa28.7■■■□□ 2.18
U2AF1-201ENST00000291552 RNF26Q9BY78 433 aaPredicted RBP28.7■■■□□ 2.18
U2AF1-201ENST00000291552 IPO5O00410 1097 aaKnown RBP28.69■■■□□ 2.18
U2AF1-201ENST00000291552 ENPP3O14638 875 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 EDIL3O43854 480 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 ATP4AP20648 1035 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 PSMA5P28066 241 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 CCT2P78371 535 aaKnown RBP28.69■■■□□ 2.18
U2AF1-201ENST00000291552 CCDC12Q8WUD4 166 aaPredicted RBP28.69■■■□□ 2.18
U2AF1-201ENST00000291552 LENG9Q96B70 501 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 SAMD11Q96NU1 681 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 SLC26A6Q9BXS9 759 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 TRPV2Q9Y5S1 764 aa28.69■■■□□ 2.18
U2AF1-201ENST00000291552 ZBTB42B2RXF5 422 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 SLC26A2P50443 739 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 MTHFD1LQ6UB35 978 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 TMEM192Q8IY95 271 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 ATP8B4Q8TF62 1192 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 ZSWIM6Q9HCJ5 1215 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 VPS54Q9P1Q0 977 aa28.68■■■□□ 2.18
U2AF1-201ENST00000291552 SMIM35A0A1B0GVV1 85 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 BACH1O14867 736 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 RPLP2P05387 115 aaKnown RBP28.67■■■□□ 2.18
U2AF1-201ENST00000291552 RUFY3Q7L099 469 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 RTN4RL1Q86UN2 441 aaPredicted RBP28.67■■■□□ 2.18
U2AF1-201ENST00000291552 IL17RAQ96F46 866 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 ZNF577Q9BSK1 485 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 ADGRA3Q8IWK6 1321 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 IGSF9BQ9UPX0 1349 aa28.67■■■□□ 2.18
U2AF1-201ENST00000291552 H3BNC9 293 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 GNA11P29992 359 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 CIITAP33076 1130 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 SETQ01105 290 aaPredicted RBP28.66■■■□□ 2.18
U2AF1-201ENST00000291552 IER5Q5VY09 327 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 MCTP2Q6DN12 878 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 MRPL38Q96DV4 380 aaKnown RBP28.66■■■□□ 2.18
U2AF1-201ENST00000291552 ZNF302Q9NR11 478 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 KDM3AQ9Y4C1 1321 aa28.66■■■□□ 2.18
U2AF1-201ENST00000291552 EPB41L2O43491 1005 aaKnown RBP28.65■■■□□ 2.18
U2AF1-201ENST00000291552 HBP1O60381 514 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 KLRC1P26715 233 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 AKAP17AQ02040 695 aaKnown RBP28.65■■■□□ 2.18
U2AF1-201ENST00000291552 GPM6BQ13491 265 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 FAM160B1Q5W0V3 765 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 SWSAP1Q6NVH7 229 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 PDXDC2PQ6P474 469 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 CRIPAKQ8N1N5 446 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 TNPO1Q92973 898 aaKnown RBP28.65■■■□□ 2.18
U2AF1-201ENST00000291552 ZNF689Q96CS4 500 aaPredicted RBP28.65■■■□□ 2.18
U2AF1-201ENST00000291552 CELF4Q9BZC1 486 aaKnown RBP28.65■■■□□ 2.18
U2AF1-201ENST00000291552 SQORQ9Y6N5 450 aa28.65■■■□□ 2.18
U2AF1-201ENST00000291552 COL1A2P08123 1366 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 PRR16Q569H4 304 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 ZNF746Q6NUN9 644 aaPredicted RBP28.64■■■□□ 2.18
U2AF1-201ENST00000291552 MIS18BP1Q6P0N0 1132 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 FIBCD1Q8N539 461 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 CCDC148Q8NFR7 591 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 UBE2ZQ9H832 354 aaPredicted RBP28.64■■■□□ 2.18
U2AF1-201ENST00000291552 PADI3Q9ULW8 664 aa28.64■■■□□ 2.18
U2AF1-201ENST00000291552 FNDC1Q4ZHG4 1894 aaPredicted RBP28.63■■■□□ 2.17
U2AF1-201ENST00000291552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.63■■■□□ 2.17
U2AF1-201ENST00000291552 KIAA0319LQ8IZA0 1049 aa28.63■■■□□ 2.17
U2AF1-201ENST00000291552 LARP6Q9BRS8 491 aaKnown RBP28.63■■■□□ 2.17
U2AF1-201ENST00000291552 UPF3BQ9BZI7 483 aaKnown RBP28.63■■■□□ 2.17
U2AF1-201ENST00000291552 TMX1Q9H3N1 280 aa28.63■■■□□ 2.17
U2AF1-201ENST00000291552 TBC1D22BQ9NU19 505 aa28.63■■■□□ 2.17
U2AF1-201ENST00000291552 MAFBQ9Y5Q3 323 aaPredicted RBP28.63■■■□□ 2.17
U2AF1-201ENST00000291552 M0QZ92 97 aa28.62■■■□□ 2.17
U2AF1-201ENST00000291552 CTNNB1P35222 781 aa28.62■■■□□ 2.17
U2AF1-201ENST00000291552 BICD2Q8TD16 824 aa28.62■■■□□ 2.17
U2AF1-201ENST00000291552 CDHR5Q9HBB8 845 aa28.62■■■□□ 2.17
U2AF1-201ENST00000291552 C5orf67F2Z3F1 127 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 DGKIO75912 1065 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 C22orf31O95567 290 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 KRT76Q01546 638 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 TMEM266Q2M3C6 531 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 ZNF484Q5JVG2 852 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 NME8Q8N427 588 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 TMEM40Q8WWA1 233 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 CLP1Q92989 425 aaKnown RBP28.61■■■□□ 2.17
U2AF1-201ENST00000291552 TM6SF1Q9BZW5 370 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 CYP46A1Q9Y6A2 500 aa28.61■■■□□ 2.17
U2AF1-201ENST00000291552 PAK2Q13177 524 aa28.6■■■□□ 2.17
U2AF1-201ENST00000291552 PTPROQ16827 1216 aa28.6■■■□□ 2.17
U2AF1-201ENST00000291552 FTHL17Q9BXU8 183 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms