RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PRR16Q569H4 304 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 FBXO47Q5MNV8 452 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 LENG9Q96B70 501 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
SNF8-201ENST00000290330 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 THEGQ9P2T0 379 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 CHD9Q3L8U1 2897 aa11.88□□□□□ -0.51
SNF8-201ENST00000290330 CHD7Q9P2D1 2997 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 HBP1O60381 514 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 UPP2O95045 317 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 DEXIO95424 95 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 ATP4AP20648 1035 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 USP11P51784 963 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 IER5Q5VY09 327 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 ZNF746Q6NUN9 644 aaPredicted RBP11.87□□□□□ -0.51
SNF8-201ENST00000290330 PDXDC2PQ6P474 469 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
SNF8-201ENST00000290330 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 ATP8B4Q8TF62 1192 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
SNF8-201ENST00000290330 ASB2Q96Q27 587 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 YME1L1Q96TA2 773 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 AGO3Q9H9G7 860 aaKnown RBP11.87□□□□□ -0.51
SNF8-201ENST00000290330 PCDHA4Q9UN74 947 aa11.87□□□□□ -0.51
SNF8-201ENST00000290330 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
SNF8-201ENST00000290330 VCANP13611 3396 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 ENPP3O14638 875 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 KLRC1P26715 233 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 ANP32AP39687 249 aaKnown RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 MRPS5P82675 430 aaKnown RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 KRT76Q01546 638 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 TBCKQ8TEA7 893 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 GDPD5Q8WTR4 605 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 AIFM3Q96NN9 605 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 LMCD1Q9NZU5 365 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 PCDHA10Q9Y5I2 948 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 TRPV2Q9Y5S1 764 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 SQORQ9Y6N5 450 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 PRRC2BQ5JSZ5 2229 aaKnown RBP11.86□□□□□ -0.51
SNF8-201ENST00000290330 MICAL3Q7RTP6 2002 aa11.86□□□□□ -0.51
SNF8-201ENST00000290330 COL1A2P08123 1366 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 M0QZ92 97 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 M0R2N6 131 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 MSH4O15457 936 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 PSAPP07602 524 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 CD52P31358 61 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 ANAPC15P60006 121 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 SCRN1Q12765 414 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
SNF8-201ENST00000290330 NPY5RQ15761 445 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 ZNF484Q5JVG2 852 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 BLIDQ8IZY5 108 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
SNF8-201ENST00000290330 NME8Q8N427 588 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 DAGLBQ8NCG7 672 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
SNF8-201ENST00000290330 RIT2Q99578 217 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 C22orf23Q9BZE7 217 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
SNF8-201ENST00000290330 TCEAL9Q9UHQ7 104 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
SNF8-201ENST00000290330 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 Q4G0T1 1027 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 GALNT17Q6IS24 598 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 TRMT1LQ7Z2T5 733 aaKnown RBP11.84□□□□□ -0.51
SNF8-201ENST00000290330 RTN4RL1Q86UN2 441 aaPredicted RBP11.84□□□□□ -0.51
SNF8-201ENST00000290330 CKAP2LQ8IYA6 745 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 LINC01599Q8WXQ3 324 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 SLC5A5Q92911 643 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 DISC1Q9NRI5 854 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
SNF8-201ENST00000290330 SIP14410 1827 aa11.83□□□□□ -0.51
SNF8-201ENST00000290330 CYP3A7-CYP3A51PA0A087WV96 503 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms