RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PCDHA11Q9Y5I1 949 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 MORC2Q9Y6X9 1032 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 SETBP1Q9Y6X0 1596 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 ADGRF5Q8IZF2 1346 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 STRCP1A6NGW2 1772 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 RAB3GAP2Q9H2M9 1393 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 JCADQ9P266 1359 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 MEIS1O00470 390 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 APAF1O14727 1248 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 RHOBTB3O94955 611 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 PRAMEF1O95521 474 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 GSNP06396 782 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 SYPP08247 313 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 FAM153BP0C7A2 387 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 ACRP10323 421 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 GDNFP39905 211 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 DCCP43146 1447 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 HK2P52789 917 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 CHRNEQ04844 493 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 SLC14A2Q15849 920 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 LARP1BQ659C4 914 aaKnown RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 VHLLQ6RSH7 139 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 C16orf54Q6UWD8 224 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 BRINP3Q76B58 766 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 WAPLQ7Z5K2 1190 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 CRACR2BQ8N4Y2 399 aaPredicted RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 WDR66Q8TBY9 1149 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 USP33Q8TEY7 942 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 ZNF622Q969S3 477 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-202ENST00000278385 LRRC59Q96AG4 307 aaKnown RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 PGBD4Q96DM1 585 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 VWCEQ96DN2 955 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 TCTN2Q96GX1 697 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 TARS2Q9BW92 718 aaKnown RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 C14orf93Q9H972 538 aaKnown RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 MBNL3Q9NUK0 354 aaKnown RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
CD44-202ENST00000278385 TCFL5Q9UL49 500 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 DGKBQ9Y6T7 804 aa5.44□□□□□ -1.54
CD44-202ENST00000278385 SPATA31E1Q6ZUB1 1445 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQ27 194 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQ64 194 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQC6 194 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQD8 194 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQH9 124 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 C9IYK1 514 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 NOP56O00567 594 aaKnown RBP5.43□□□□□ -1.54
CD44-202ENST00000278385 ESR1P03372 595 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 RENBPP51606 427 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 POU4F1Q01851 419 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 SAFBQ15424 915 aaKnown RBP eCLIP5.43□□□□□ -1.54
CD44-202ENST00000278385 KCNMB1Q16558 191 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 GAB4Q2WGN9 574 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 COBLL1Q53SF7 1204 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 ZC3H12BQ5HYM0 836 aaKnown RBP5.43□□□□□ -1.54
CD44-202ENST00000278385 WDR45BQ5MNZ6 344 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 TSHZ3Q63HK5 1081 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 KIAA1211LQ6NV74 962 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 LHFPL2Q6ZUX7 228 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 TMC3Q7Z5M5 1100 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 LRRN4CLQ8ND94 238 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 PPP1R14AQ96A00 147 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 TRIM8Q9BZR9 551 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 PUS7LQ9H0K6 701 aaKnown RBP5.43□□□□□ -1.54
CD44-202ENST00000278385 RIC8AQ9NPQ8 531 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 FAM53CQ9NYF3 392 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 WHRNQ9P202 907 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 ACAD8Q9UKU7 415 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 SPATA31A6Q5VVP1 1343 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 NEXMIFQ5QGS0 1516 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 SPHKAPQ2M3C7 1700 aa5.43□□□□□ -1.54
CD44-202ENST00000278385 ABCC11Q96J66 1382 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 PTCH1Q13635 1447 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 CLTCL1P53675 1640 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 FITM1A5D6W6 292 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 AGRPO00253 132 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GABRDO14764 452 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GPR39O43194 453 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 SNX2O60749 519 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 DDAH1O94760 285 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 CD247P20963 164 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 TNFAIP3P21580 790 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GTF2A2P52657 109 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GJA9P57773 515 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 NUCB1Q02818 461 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 STK3Q13188 491 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 PDE1CQ14123 709 aaPredicted RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 GBX1Q14549 363 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 TAF11Q15544 211 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 ZYXQ15942 572 aaKnown RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 MINDY4Q4G0A6 757 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 DCAF15Q66K64 600 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 TMEM132EQ6IEE7 984 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms