RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SMAP1Q8IYB5 467 aaPredicted RBP10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 OR6J1Q8NGC5 347 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 SEPT1Q8WYJ6 367 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 LARP4BQ92615 738 aaKnown RBP10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 BHMT2Q9H2M3 363 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 USP25Q9UHP3 1055 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
SNRNP40-201ENST00000263694 NOP56O00567 594 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 STBD1O95210 358 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 SLC12A3P55017 1021 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 NPEPPSP55786 919 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 PSMC5P62195 406 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 DPYDQ12882 1025 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 IRF5Q13568 498 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 ARSHQ5FYA8 562 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 PLA2G4FQ68DD2 849 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 RBM43Q6ZSC3 357 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 PYM1Q9BRP8 204 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 ZSWIM4Q9H7M6 989 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 ZNF302Q9NR11 478 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 FAM184BQ9ULE4 1060 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 PTCH2Q9Y6C5 1203 aa10.87□□□□□ -0.67
SNRNP40-201ENST00000263694 IGKV6D-21A0A0A0MT36 114 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 CTAGE5O15320 804 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 SLC26A4O43511 780 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 EYA4O95677 639 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 MARK3P27448 753 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 BEX3Q00994 111 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 PRKCEQ02156 737 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 ANO5Q75V66 913 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 GPBP1Q86WP2 473 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 PPP1R13LQ8WUF5 828 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 NACC1Q96RE7 527 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 RUSC1Q9BVN2 902 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 CUEDC2Q9H467 287 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 CENPFP49454 3210 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 GNRH1P01148 92 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 CYP11B2P19099 503 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 STAT5BP51692 787 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 TLK2Q86UE8 772 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 GAS2L3Q86XJ1 694 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 C4orf19Q8IY42 314 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 ELOA2Q8IYF1 753 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 SYT2Q8N9I0 419 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 PPTC7Q8NI37 304 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 SH3TC2Q8TF17 1288 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 DDX12PQ92771 950 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 GLG1Q92896 1179 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
SNRNP40-201ENST00000263694 IGSF9BQ9UPX0 1349 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 MYADML2A6NDP7 307 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 KLRC4O43908 158 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 LGR5O75473 907 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 LETM1O95202 739 aaPredicted RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 LYPLA2O95372 231 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 MYCP01106 439 aaPredicted RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 HMGCRP04035 888 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 RPN1P04843 607 aaKnown RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 INHAP05111 366 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 LGALS2P05162 132 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 MMP3P08254 477 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 AKR1A1P14550 325 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 BMP6P22004 513 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 MUTP22033 750 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 SARSP49591 514 aaKnown RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 TYRO3Q06418 890 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 RINT1Q6NUQ1 792 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 MAEAQ7L5Y9 396 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 TRMT44Q8IYL2 757 aaKnown RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 ATP6V0A1Q93050 837 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 HPS3Q969F9 1004 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 SMARCE1Q969G3 411 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 EMID1Q96A84 441 aaPredicted RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 DNAJC19Q96DA6 116 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 FUCA2Q9BTY2 467 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 AZI2Q9H6S1 392 aa10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 SEPT9Q9UHD8 586 aaPredicted RBP10.85□□□□□ -0.67
SNRNP40-201ENST00000263694 HOOK1Q9UJC3 728 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms