RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 RAD23BP54727 409 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 TLK1Q9UKI8 766 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 TRIM37O94972 964 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 PMS2P54278 862 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 SH3BGRP55822 239 aaPredicted RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 CUL1Q13616 776 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 SARM1Q6SZW1 724 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 TRIM10Q9UDY6 481 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 INO80B-WBP1J3KQ70 363 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 SNAP23O00161 211 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 POLD1P28340 1107 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 HAUS8Q9BT25 410 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 INO80BQ9C086 356 aaPredicted RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 FGFR4P22455 802 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 KIF19Q2TAC6 998 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 ALKBH8Q96BT7 664 aaKnown RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
SMG6-201ENST00000263073 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 SCINQ9Y6U3 715 aa12.97□□□□□ -0.33
SMG6-201ENST00000263073 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 PPP2R2AP63151 447 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 PDCD2Q16342 344 aaPredicted RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 LAD1O00515 517 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 NOP14P78316 857 aaKnown RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 CEP170P1Q96L14 293 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 MAGEF1Q9HAY2 307 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 AKT3Q9Y243 479 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 CYP2D6P10635 497 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 OCRLQ01968 901 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 FMR1NBQ8N0W7 255 aaPredicted RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 ARL8AQ96BM9 186 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 AK8Q96MA6 479 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 KLC4Q9NSK0 619 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.33
SMG6-201ENST00000263073 ORC6Q9Y5N6 252 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 ZNF521Q96K83 1311 aa12.96□□□□□ -0.33
SMG6-201ENST00000263073 ENO4A6NNW6 628 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 HSPA4LO95757 839 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 TRAPPC10P48553 1259 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 AOC3Q16853 763 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 LRRC36Q1X8D7 754 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 PDZD4Q76G19 769 aaPredicted RBP12.96□□□□□ -0.34
SMG6-201ENST00000263073 RNF217Q8TC41 542 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.34
SMG6-201ENST00000263073 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 EIF3BP55884 814 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 IQCB1Q15051 598 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 RAB44Q7Z6P3 723 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 MXI1P50539 228 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 RWDD2BP57060 319 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 THOC5Q13769 683 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 CENPUQ71F23 418 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 ADPGKQ9BRR6 497 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 AMNQ9BXJ7 453 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 ABCA8O94911 1581 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 DTX3LQ8TDB6 740 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 SLC13A1Q9BZW2 595 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 BHMT2Q9H2M3 363 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 IFNAR1P17181 557 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 YWHAHQ04917 246 aaPredicted RBP12.95□□□□□ -0.34
SMG6-201ENST00000263073 GRAMD4Q6IC98 578 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
SMG6-201ENST00000263073 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms