RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CCT8L1PA6NM43 557 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 PALM2Q8IXS6 379 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 CCDC110Q8TBZ0 833 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 NBPF3Q9H094 633 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 SLITRK6Q9H5Y7 841 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 LARSQ9P2J5 1176 aaKnown RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 SSU72P8A0A1W2PR75 194 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 HSD17B3P37058 310 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 RCN2Q14257 317 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 KAZNQ674X7 775 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 ZC3H18Q86VM9 953 aaKnown RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 BAZ2BQ9UIF8 2168 aaKnown RBP17.52■□□□□ 0.4
SREBF1-201ENST00000261646 MAPK13O15264 365 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 PFDN1O60925 122 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 SLC18A3Q16572 532 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 LRRC23Q53EV4 343 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-201ENST00000261646 GIMAP8Q8ND71 665 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-201ENST00000261646 CASKIN2Q8WXE0 1202 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 SH3GL3Q99963 347 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
SREBF1-201ENST00000261646 PODXLO00592 558 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 SKAP2O75563 359 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-201ENST00000261646 GLI1P08151 1106 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 SP4Q02446 784 aa17.52■□□□□ 0.4
SREBF1-201ENST00000261646 DIP2AQ14689 1571 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 TCP11X1B4DZS4 312 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 CFBP00751 764 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 LRIG3Q6UXM1 1119 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 TRPM8Q7Z2W7 1104 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 RPUSD2Q8IZ73 545 aaKnown RBP17.52■□□□□ 0.39
SREBF1-201ENST00000261646 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.39
SREBF1-201ENST00000261646 SREK1Q8WXA9 508 aaKnown RBP17.52■□□□□ 0.39
SREBF1-201ENST00000261646 CCSER1Q9C0I3 900 aa17.52■□□□□ 0.39
SREBF1-201ENST00000261646 PROM2Q8N271 834 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-201ENST00000261646 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-201ENST00000261646 VCX3AQ9NNX9 186 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 EXOC1LA0A1B0GW35 172 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 HARSP12081 509 aaKnown RBP17.51■□□□□ 0.39
SREBF1-201ENST00000261646 PSMC2P35998 433 aaKnown RBP17.51■□□□□ 0.39
SREBF1-201ENST00000261646 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.51■□□□□ 0.391e-7■■■■■ 113.8
SREBF1-201ENST00000261646 TSNARE1Q96NA8 513 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 EDEM3Q9BZQ6 932 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 MYBL2P10244 700 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 SCTRP47872 440 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 MYL7Q01449 175 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 CRYMQ14894 314 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 NTRK3Q16288 839 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 CCDC89Q8N998 374 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 SLC44A5Q8NCS7 719 aa17.51■□□□□ 0.39
SREBF1-201ENST00000261646 CELF4Q9BZC1 486 aaKnown RBP17.51■□□□□ 0.39
SREBF1-201ENST00000261646 UBE2SQ16763 222 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 TMEM139Q8IV31 216 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 MYO5BQ9ULV0 1848 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 PDE2AO00408 941 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-201ENST00000261646 FGFR4P22455 802 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 COG7P83436 770 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 SATB1Q01826 763 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 ODR4Q5SWX8 454 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 NAIF1Q69YI7 327 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-201ENST00000261646 USP38Q8NB14 1042 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 RAPGEF5Q92565 580 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 LRRC37BQ96QE4 947 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 NUDCD1Q96RS6 583 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-201ENST00000261646 GTF2IP78347 998 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 TSEN2Q8NCE0 465 aaKnown RBP17.5■□□□□ 0.39
SREBF1-201ENST00000261646 TGS1Q96RS0 853 aaKnown RBP17.5■□□□□ 0.39
SREBF1-201ENST00000261646 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 PCDHA1Q9Y5I3 950 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 RASA4BC9J798 803 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 RASA4O43374 803 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 MECOMQ03112 1051 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 PSMD6Q15008 389 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 RABGAP1Q9Y3P9 1069 aa17.5■□□□□ 0.39
SREBF1-201ENST00000261646 COASYQ13057 564 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 GLYCTKQ8IVS8 523 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 BBOF1Q8ND07 529 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
SREBF1-201ENST00000261646 ERGIC2Q96RQ1 377 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 BRIP1Q9BX63 1249 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 MAK16Q9BXY0 300 aaKnown RBP17.49■□□□□ 0.39
SREBF1-201ENST00000261646 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 SH3GLB2Q9NR46 395 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 E9PMD0 336 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 PLCB4Q15147 1175 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 AGBL2Q5U5Z8 902 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
SREBF1-201ENST00000261646 UBE2TQ9NPD8 197 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms