RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 TTLL11Q8NHH1 800 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 NEK9Q8TD19 979 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SYN2Q92777 582 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 EPAS1Q99814 870 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM51Q9BSJ1 452 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM7Q9C029 511 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ZCWPW1Q9H0M4 648 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TMEM60Q9H2L4 133 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CUEDC2Q9H467 287 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 MAGEF1Q9HAY2 307 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CNTNAP5Q8WYK1 1306 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ABLIM1O14639 778 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RNF8O76064 485 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 OAS1P00973 400 aaKnown RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 NUDT17P0C025 328 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ARID4AP29374 1257 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RAD23BP54727 409 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 KCNMA1Q12791 1236 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 NUGGCQ68CJ6 796 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TMEM154Q6P9G4 183 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ARHGAP22Q7Z5H3 698 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CABP7Q86V35 215 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SRBD1Q8N5C6 995 aaKnown RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SEC14L1Q92503 715 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RAB3IPQ96QF0 476 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 C7orf25Q9BPX7 421 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 PAIP2Q9BPZ3 127 aaKnown RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 GORASP1Q9BQQ3 440 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SYT15Q9BQS2 421 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 PABPC3Q9H361 631 aaKnown RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 FGFR1OP2Q9NVK5 253 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 WDR35Q9P2L0 1181 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 NKX1-2Q9UD57 310 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ABCB11O95342 1321 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 GPR75-ASB3A0A0A6YYF3 556 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-201ENST00000261443 MAP3K13O43283 966 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 AGTP01019 485 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 GNAZP19086 355 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ATP6V1C1P21283 382 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 CABP4P57796 275 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 AMPD3Q01432 767 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 TROAPQ12815 778 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ADAM9Q13443 819 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 LBRQ14739 615 aaKnown RBP7.85□□□□□ -1.15
CSDE1-201ENST00000261443 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ARHGAP27Q6ZUM4 889 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 DAAM2Q86T65 1068 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 BLIDQ8IZY5 108 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 MIGA1Q8NAN2 632 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 SLC17A8Q8NDX2 589 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 RASGRP4Q8TDF6 673 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 LSM14BQ9BX40 385 aaKnown RBP7.85□□□□□ -1.15
CSDE1-201ENST00000261443 TXLNGYQ9BZA5 131 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 RXFP1Q9HBX9 757 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ZMYND8Q9ULU4 1186 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ARL2BPQ9Y2Y0 163 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ASB3Q9Y575 518 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC194A0A1B0GVG4 234 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 TCP11X1B4DZS4 312 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 VEGFAP15692 232 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-201ENST00000261443 CALML3P27482 149 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 POLE2P56282 527 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 KLC1Q07866 573 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 CUL3Q13618 768 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 PLS1Q14651 629 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 LRRC14Q15048 493 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 CNGA2Q16280 664 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 PEX26Q7Z412 305 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 FITM2Q8N6M3 262 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 FAM133AQ8N9E0 248 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 SPATA5Q8NB90 893 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 KLHL23Q8NBE8 558 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 MGARPQ8TDB4 240 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 RNPEPL1Q9HAU8 725 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 ETNK1Q9HBU6 452 aa7.85□□□□□ -1.15
CSDE1-201ENST00000261443 NOL4O94818 638 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 CALB2P22676 271 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 SLCO1A2P46721 670 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 SLC29A2Q14542 456 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 ASIC2Q16515 512 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 PFKFB3Q16875 520 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 SGSM1Q2NKQ1 1148 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 COBLL1Q53SF7 1204 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 TOM1L2Q6ZVM7 507 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 TAOK1Q7L7X3 1001 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 SPATA21Q7Z572 469 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 COL23A1Q86Y22 540 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 UHMK1Q8TAS1 419 aaKnown RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 RNF25Q96BH1 459 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 DCAF5Q96JK2 942 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 RPS6KC1Q96S38 1066 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 STMN4Q9H169 189 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-201ENST00000261443 VCXQ9H320 206 aa7.84□□□□□ -1.15
CSDE1-201ENST00000261443 EPB41L4BQ9H329 900 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms