RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 DNAJB3Q8WWF6 145 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 TCF25Q9BQ70 676 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
RFPL3-201ENST00000249007 HOXA13P31271 388 aaPredicted RBP13.87□□□□□ -0.19
RFPL3-201ENST00000249007 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
RFPL3-201ENST00000249007 GHRHRQ02643 423 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 NEDD9Q14511 834 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 CASP10Q92851 521 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 CEP295Q9C0D2 2601 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 ZFYVE26Q68DK2 2539 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 HIDE1A8MVS5 230 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 MTHFRP42898 656 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 SP4Q02446 784 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 PPFIA1Q13136 1202 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
RFPL3-201ENST00000249007 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
RFPL3-201ENST00000249007 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
RFPL3-201ENST00000249007 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 PADI3Q9ULW8 664 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 LZTS1Q9Y250 596 aa13.87□□□□□ -0.19
RFPL3-201ENST00000249007 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 PAK2Q13177 524 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
RFPL3-201ENST00000249007 SIX5Q8N196 739 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 DCLK2Q8N568 766 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 COLGALT1Q8NBJ5 622 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 USTQ9Y2C2 406 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 PCDHB7Q9Y5E2 793 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 HCFC2Q9Y5Z7 792 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 SQORQ9Y6N5 450 aa13.86□□□□□ -0.19
RFPL3-201ENST00000249007 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 CACNA1IQ9P0X4 2223 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 MBLAC1A4D2B0 266 aaPredicted RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 RPLP2P05387 115 aaKnown RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 ALX1Q15699 326 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 GRIK4Q16099 956 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 ASPRV1Q53RT3 343 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 IER5Q5VY09 327 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 FAM49AQ9H0Q0 323 aaPredicted RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 TYW1Q9NV66 732 aaKnown RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
RFPL3-201ENST00000249007 TELO2Q9Y4R8 837 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 PCDHA1Q9Y5I3 950 aa13.85□□□□□ -0.19
RFPL3-201ENST00000249007 IGSF9BQ9UPX0 1349 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 M0QZ92 97 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 SARSP49591 514 aaKnown RBP13.84□□□□□ -0.19
RFPL3-201ENST00000249007 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 RIN2Q8WYP3 895 aaPredicted RBP13.84□□□□□ -0.19
RFPL3-201ENST00000249007 INPP4AQ96PE3 977 aaPredicted RBP13.84□□□□□ -0.19
RFPL3-201ENST00000249007 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
RFPL3-201ENST00000249007 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
RFPL3-201ENST00000249007 LOXHD1Q8IVV2 1947 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 STK25O00506 426 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 FIBPO43427 364 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 FGAP02671 866 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 MS4A1P11836 297 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 LAG3P18627 525 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 MARK3P27448 753 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 PLCB3Q01970 1234 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 TDGQ13569 410 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 RARS2Q5T160 578 aaKnown RBP13.83□□□□□ -0.2
RFPL3-201ENST00000249007 KIAA0319Q5VV43 1072 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 KIAA1841Q6NSI8 718 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 TMC7Q7Z402 723 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 TMX1Q9H3N1 280 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 TRPV2Q9Y5S1 764 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.2
RFPL3-201ENST00000249007 CNOT1A5YKK6 2376 aaKnown RBP13.83□□□□□ -0.2
RFPL3-201ENST00000249007 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
RFPL3-201ENST00000249007 STAM2O75886 525 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 EOMESO95936 686 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 PARP1P09874 1014 aaKnown RBP13.82□□□□□ -0.2
RFPL3-201ENST00000249007 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
RFPL3-201ENST00000249007 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
RFPL3-201ENST00000249007 SDHBP21912 280 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms