RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
HMGCL-201ENST00000235958 ATP6V0A1Q93050 837 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PAWRQ96IZ0 340 aaKnown RBP11.39□□□□□ -0.59
HMGCL-201ENST00000235958 GLT1D1Q96MS3 346 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 PLIN2Q99541 437 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 LXNQ9BS40 222 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
HMGCL-201ENST00000235958 KIAA1024Q9UPX6 916 aa11.39□□□□□ -0.59
HMGCL-201ENST00000235958 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 SCN10AQ9Y5Y9 1956 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1W2PQ45 241 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1W2PQY0 241 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 LYPLA2O95372 231 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 INSRRP14616 1297 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 MUTP22033 750 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 GRB10Q13322 594 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 XKR3Q5GH77 459 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 HYIQ5T013 277 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 RESP18Q5W5W9 173 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 HAUS3Q68CZ6 603 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 ANO5Q75V66 913 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 OTUD6AQ7L8S5 288 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 DIS3LQ8TF46 1054 aaKnown RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 ATP8B4Q8TF62 1192 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 GBP4Q96PP9 640 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 NACC1Q96RE7 527 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 KATNAL1Q9BW62 490 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
HMGCL-201ENST00000235958 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 EVPLQ92817 2033 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 BRCA2P51587 3418 aa11.38□□□□□ -0.59
HMGCL-201ENST00000235958 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 A0A087X0B3 334 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1B0GVL5 298 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1W2PQ27 194 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1W2PQ64 194 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 A0A1W2PQD8 194 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 TMEM150BA6NC51 233 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 SLC26A4O43511 780 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 HBP1O60381 514 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 GADD45BO75293 160 aaPredicted RBP11.37□□□□□ -0.59
HMGCL-201ENST00000235958 CAPN15O75808 1086 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 OATP04181 439 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 COL6A1P12109 1028 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 YWHABP31946 246 aaKnown RBP11.37□□□□□ -0.59
HMGCL-201ENST00000235958 TXLNAP40222 546 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 CDK7P50613 346 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 PRKCEQ02156 737 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 RRAGBQ5VZM2 374 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 SLC39A5Q6ZMH5 540 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 C7orf31Q8N865 590 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 TMEM87AQ8NBN3 555 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
HMGCL-201ENST00000235958 CDK5RAP3Q96JB5 506 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 FAM167AQ96KS9 214 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 SH2D3AQ9BRG2 576 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 NT5C3AQ9H0P0 336 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 HDAC6Q9UBN7 1215 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 TRPC6Q9Y210 931 aa11.37□□□□□ -0.59
HMGCL-201ENST00000235958 RRN3P2A6NIE6 340 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 ZBTB42B2RXF5 422 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 E9PMD0 336 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 ARVCFO00192 962 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 POLR2DO15514 142 aaKnown RBP11.36□□□□□ -0.59
HMGCL-201ENST00000235958 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 SMIM10L2BP0DMW5 78 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 PLCG1P19174 1290 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 ATN1P54259 1190 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-201ENST00000235958 NPEPPSP55786 919 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 HIC1Q14526 733 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 TARBP2Q15633 366 aaKnown RBP11.36□□□□□ -0.59
HMGCL-201ENST00000235958 FAM47CQ5HY64 1035 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 ZNF484Q5JVG2 852 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 KCNK18Q7Z418 384 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 UBE2Q1Q7Z7E8 422 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 PDILTQ8N807 584 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 FSIP1Q8NA03 581 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 RASSF8Q8NHQ8 419 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 C11orf49Q9H6J7 331 aa11.36□□□□□ -0.59
HMGCL-201ENST00000235958 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms