RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MECOMQ03112 1051 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 E2F5Q15329 346 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 TRIM67Q6ZTA4 783 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 CENPUQ71F23 418 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MB21D1Q8N884 522 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MAML1Q92585 1016 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MID2Q9UJV3 735 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 UBN2Q6ZU65 1347 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MARK3P27448 753 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 KLC3Q6P597 504 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 SRRM1Q8IYB3 904 aaKnown RBP12.43□□□□□ -0.42
LAMA4-201ENST00000230538 PYROXD1Q8WU10 500 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 GINM1Q9NU53 330 aa12.43□□□□□ -0.42
LAMA4-201ENST00000230538 MAP3K7O43318 606 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 PMLP29590 882 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 MIGA2Q7L4E1 593 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 CDO1Q16878 200 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 ANLNQ9NQW6 1124 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 PACSIN2Q9UNF0 486 aaPredicted RBP12.42□□□□□ -0.42
LAMA4-201ENST00000230538 ATG16L1Q676U5 607 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 FBXL13Q8NEE6 735 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 CDC26Q8NHZ8 85 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 RAD17O75943 681 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 PSMA2P25787 234 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 EIF3BP55884 814 aaKnown RBP12.42□□□□□ -0.42
LAMA4-201ENST00000230538 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
LAMA4-201ENST00000230538 NLRP10Q86W26 655 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 CFLARO15519 480 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 PLEKHA8P1O95397 391 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 CDK8P49336 464 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 RWDD2BP57060 319 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 NLRP4Q96MN2 994 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 SERPINI1Q99574 410 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 LMCD1Q9NZU5 365 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 ANGPTL2Q9UKU9 493 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 METP08581 1390 aa12.42□□□□□ -0.42
LAMA4-201ENST00000230538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 CHEK2O96017 543 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 NR1D1P20393 614 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 MRPS25P82663 173 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 ARID5BQ14865 1188 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 C6orf118Q5T5N4 469 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 SUCLA2Q9P2R7 463 aaPredicted RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 SCINQ9Y6U3 715 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 SLFN12LQ6IEE8 588 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 FAF2Q96CS3 445 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 BZW1Q7L1Q6 419 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 RNF217Q8TC41 542 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 EIF2AK2P19525 551 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 ADCY2Q08462 1091 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 CUL1Q13616 776 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 KRT31Q15323 416 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 GCNAQ96QF7 691 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 K7ERI5 159 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 ESRRAP11474 423 aaPredicted RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 ATP1A3P13637 1013 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 CYP27A1Q02318 531 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
LAMA4-201ENST00000230538 DNAJC17Q9NVM6 304 aaKnown RBP12.41□□□□□ -0.42
LAMA4-201ENST00000230538 PEX3P56589 373 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
LAMA4-201ENST00000230538 EXT2Q93063 718 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 TRAIPQ9BWF2 469 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
LAMA4-201ENST00000230538 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 F8W8V4 182 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 PFDN1O60925 122 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 TJP3O95049 919 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 KRT80Q6KB66 452 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 PDIK1LQ8N165 341 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 ALKBH8Q96BT7 664 aaKnown RBP12.4□□□□□ -0.42
LAMA4-201ENST00000230538 EFCAB6Q5THR3 1501 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 ACTR5Q9H9F9 607 aaPredicted RBP12.4□□□□□ -0.42
LAMA4-201ENST00000230538 PRKAG2Q9UGJ0 569 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 IPO5O00410 1097 aaKnown RBP12.4□□□□□ -0.42
LAMA4-201ENST00000230538 ACSL3O95573 720 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 TAF11Q15544 211 aa12.4□□□□□ -0.42
LAMA4-201ENST00000230538 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms