RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LCA5LO95447 670 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 FAM228BP0C875 321 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 TNNC1P63316 161 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 HOOK2Q96ED9 719 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 TRIM51Q9BSJ1 452 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 TTI1O43156 1089 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 PJA2O43164 708 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 SART1O43290 800 aaKnown RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 HNRNPH3P31942 346 aaKnown RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 KDM4CQ9H3R0 1056 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 MMEP08473 750 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 ALDH5A1P51649 535 aaPredicted RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 SLC8A3P57103 927 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 LETM2Q2VYF4 491 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 PSMD1Q99460 953 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 MMTAG2Q9BU76 263 aaKnown RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
SF1-201ENST00000227503 SAP30BPQ9UHR5 308 aaKnown RBP15.38■□□□□ 0.05
SF1-201ENST00000227503 CCNT1O60563 726 aaKnown RBP15.37■□□□□ 0.05
SF1-201ENST00000227503 BAG3O95817 575 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 VIMP08670 466 aaKnown RBP15.37■□□□□ 0.05
SF1-201ENST00000227503 NAPAP54920 295 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 GSTO1P78417 241 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 AP1ARQ63HQ0 302 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 TRIM68Q6AZZ1 485 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 SBF2Q86WG5 1849 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 BICDL2A1A5D9 508 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 KIF3CO14782 793 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 MAP3K13O43283 966 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 UBOX5O94941 541 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 POLR2FP61218 127 aaKnown RBP15.37■□□□□ 0.05
SF1-201ENST00000227503 KCNMA1Q12791 1236 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■■ 28.9
SF1-201ENST00000227503 FIGNQ5HY92 759 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 AMIGO3Q86WK7 504 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 SAAL1Q96ER3 474 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 ZCWPW1Q9H0M4 648 aa15.37■□□□□ 0.05
SF1-201ENST00000227503 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 SLCO1A2P46721 670 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 MIS18BP1Q6P0N0 1132 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 FAM114A1Q8IWE2 563 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 TAF4BQ92750 862 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
SF1-201ENST00000227503 PRMT1Q99873 361 aaKnown RBP15.36■□□□□ 0.05
SF1-201ENST00000227503 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
SF1-201ENST00000227503 CCDC113Q9H0I3 377 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 NAV1Q8NEY1 1877 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 SMNDC1O75940 238 aaKnown RBP eCLIP15.36■□□□□ 0.051e-7■□□□□ 8.9
SF1-201ENST00000227503 MYBP10242 640 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 ABL2P42684 1182 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 IFI35P80217 286 aaPredicted RBP15.36■□□□□ 0.05
SF1-201ENST00000227503 BIRC3Q13489 604 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 TMC3Q7Z5M5 1100 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 LRRC45Q96CN5 670 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 FAM129AQ9BZQ8 928 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 MLXIPLQ9NP71 852 aa15.36■□□□□ 0.05
SF1-201ENST00000227503 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
SF1-201ENST00000227503 IGF2BP3O00425 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
SF1-201ENST00000227503 TECP42680 631 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NAB2Q15742 525 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 ERMARDQ5T6L9 678 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NEK8Q86SG6 692 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 MGARPQ8TDB4 240 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 F8VZ95 297 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 GNPATO15228 680 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 CALRP27797 417 aaKnown RBP15.35■□□□□ 0.05
SF1-201ENST00000227503 CDK8P49336 464 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NFIXQ14938 502 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 LRRC14Q15048 493 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 SLC17A8Q8NDX2 589 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 CCDC47Q96A33 483 aaKnown RBP15.35■□□□□ 0.05
SF1-201ENST00000227503 ZNF317Q96PQ6 595 aaPredicted RBP15.35■□□□□ 0.05
SF1-201ENST00000227503 C6orf50Q9HD87 102 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 PNMA3Q9UL41 463 aa15.35■□□□□ 0.05
SF1-201ENST00000227503 NOC2LQ9Y3T9 749 aaKnown RBP15.35■□□□□ 0.05
SF1-201ENST00000227503 EVI5O60447 810 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GNA11P29992 359 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 CEP120Q8N960 986 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms