RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 SKIV2LQ15477 1246 aaKnown RBP20.44■□□□□ 0.86
PFN1-201ENST00000225655 AAK1Q2M2I8 961 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 MCTP2Q6DN12 878 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 CCDC148Q8NFR7 591 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 GDPD5Q8WTR4 605 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 CRYGNQ8WXF5 182 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 SNX21Q969T3 373 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 TMX3Q96JJ7 454 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 MTUS1Q9ULD2 1270 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 KIF3AQ9Y496 699 aa20.44■□□□□ 0.86
PFN1-201ENST00000225655 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 ATG7O95352 703 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 CYP3A4P08684 503 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 SLC26A2P50443 739 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 STAT5BP51692 787 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 HMGN5P82970 282 aaKnown RBP20.43■□□□□ 0.86
PFN1-201ENST00000225655 PKN1Q16512 942 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 JAKMIP3Q5VZ66 844 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 ADAMTS19Q8TE59 1207 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 DNAJB3Q8WWF6 145 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 C6orf50Q9HD87 102 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 TRPC6Q9Y210 931 aa20.43■□□□□ 0.86
PFN1-201ENST00000225655 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.43■□□□□ 0.86
PFN1-201ENST00000225655 REV3LO60673 3130 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 IGKV6D-21A0A0A0MT36 114 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 K7ELQ4 463 aaPredicted RBP20.42■□□□□ 0.86
PFN1-201ENST00000225655 TNFRSF10AO00220 468 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 GHRP10912 638 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 IGBP1P78318 339 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 LPIN1Q14693 890 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 PLCB4Q15147 1175 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 FAM177A1Q8N128 213 aaPredicted RBP20.42■□□□□ 0.86
PFN1-201ENST00000225655 REXO1Q8N1G1 1221 aaKnown RBP20.42■□□□□ 0.86
PFN1-201ENST00000225655 YME1L1Q96TA2 773 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 ORC3Q9UBD5 711 aaPredicted RBP20.42■□□□□ 0.86
PFN1-201ENST00000225655 COG5Q9UP83 839 aa20.42■□□□□ 0.86
PFN1-201ENST00000225655 IGLV3-22A0A075B6J6 115 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 CD2BP2O95400 341 aaKnown RBP20.41■□□□□ 0.86
PFN1-201ENST00000225655 CCNE2O96020 404 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 GNA11P29992 359 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 MRPS6P82932 125 aaKnown RBP20.41■□□□□ 0.86
PFN1-201ENST00000225655 TFF2Q03403 129 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 FBXO47Q5MNV8 452 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 PLA2G4DQ86XP0 818 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 FAM184AQ8NB25 1140 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 NSUN7Q8NE18 718 aaKnown RBP20.41■□□□□ 0.86
PFN1-201ENST00000225655 FBXO22Q8NEZ5 403 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 C17orf80Q9BSJ5 609 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 SH3GLB2Q9NR46 395 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 CDY2AQ9Y6F7 541 aa20.41■□□□□ 0.86
PFN1-201ENST00000225655 POTEB3A0JP26 581 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 ADAMTS3O15072 1205 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 NCOR1O75376 2440 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 UPP2O95045 317 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 BMP1P13497 986 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 TRIM29Q14134 588 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 IER5Q5VY09 327 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 POTEBQ6S5H4 581 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 ABHD15Q6UXT9 468 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 NLRC5Q86WI3 1866 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 ZBTB10Q96DT7 871 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 SAMD11Q96NU1 681 aa20.4■□□□□ 0.86
PFN1-201ENST00000225655 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.86
PFN1-201ENST00000225655 DDX39AO00148 427 aaKnown RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 IPO5O00410 1097 aaKnown RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 HSP90AA1P07900 732 aaKnown RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 SETQ01105 290 aaPredicted RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 BECN1Q14457 450 aa20.39■□□□□ 0.85
PFN1-201ENST00000225655 FAM160B1Q5W0V3 765 aa20.39■□□□□ 0.85
PFN1-201ENST00000225655 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
PFN1-201ENST00000225655 HLA-CQ95604 372 aa20.39■□□□□ 0.85
PFN1-201ENST00000225655 UHRF1Q96T88 793 aaPredicted RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 FAM49AQ9H0Q0 323 aaPredicted RBP20.39■□□□□ 0.85
PFN1-201ENST00000225655 SQORQ9Y6N5 450 aa20.39■□□□□ 0.85
PFN1-201ENST00000225655 TCF20Q9UGU0 1960 aaKnown RBP20.38■□□□□ 0.85
PFN1-201ENST00000225655 CTDNEP1O95476 244 aa20.38■□□□□ 0.85
PFN1-201ENST00000225655 KCNQ1P51787 676 aa20.38■□□□□ 0.85
PFN1-201ENST00000225655 EPC2Q52LR7 807 aa20.38■□□□□ 0.85
PFN1-201ENST00000225655 TRAPPC12Q8WVT3 735 aa20.38■□□□□ 0.85
PFN1-201ENST00000225655 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
PFN1-201ENST00000225655 TTC3P53804 2025 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 LOXHD1Q8IVV2 1947 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 SMIM35A0A1B0GVV1 85 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 M0QZ92 97 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 ENPP3O14638 875 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 BACH1O14867 736 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 CIITAP33076 1130 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 NLRP5P59047 1200 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 MIS18BP1Q6P0N0 1132 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 MTHFD1LQ6UB35 978 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 CCDC60Q8IWA6 550 aaPredicted RBP20.37■□□□□ 0.85
PFN1-201ENST00000225655 NME8Q8N427 588 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 ATP8B4Q8TF62 1192 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
PFN1-201ENST00000225655 AGO3Q9H9G7 860 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms