RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.21
UBE2D4-201ENST00000222402 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.21
UBE2D4-201ENST00000222402 A0A087X0T9 212 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 TLDC2A0PJX2 215 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 SMIM23A6NLE4 172 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 RSPH10B2B2RC85 870 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 GOLGA8KD6RF30 607 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 FAM228BP0C875 321 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 RSPH10BP0C881 870 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 HOXA10P31260 410 aaPredicted RBP16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 ECM1Q16610 540 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 DPH5Q9H2P9 285 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 FERP16591 822 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 FECHP22830 423 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 PSMC6P62333 389 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 EMBQ6PCB8 327 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 NSMFQ6X4W1 530 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 MTMR8Q96EF0 704 aa16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 LARSQ9P2J5 1176 aaKnown RBP16.33■□□□□ 0.2
UBE2D4-201ENST00000222402 ABCB11O95342 1321 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 LRRC55Q6ZSA7 311 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 UCHL3P15374 230 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 RPA1P27694 616 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 LRRC45Q96CN5 670 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 NACC1Q96RE7 527 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 RRP15Q9Y3B9 282 aaKnown RBP16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 CHRNA5P30532 468 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 UTP11Q9Y3A2 253 aaKnown RBP16.32■□□□□ 0.2
UBE2D4-201ENST00000222402 BCRP11274 1271 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 CCT5P48643 541 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 EDRF1Q3B7T1 1238 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 MYL7Q01449 175 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 VIPAS39Q9H9C1 493 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 PGRMC1O00264 195 aaKnown RBP16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 DNAAF5Q86Y56 855 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 CYP2W1Q8TAV3 490 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 PACSIN1Q9BY11 444 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
UBE2D4-201ENST00000222402 PDXKO00764 312 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 C21orf2O43822 256 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 PTK2Q05397 1052 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 GABPAQ06546 454 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 FMNL3Q8IVF7 1028 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 TRIM59Q8IWR1 403 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 PITPNM2Q9BZ72 1349 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 ZNF263O14978 683 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 SPOPO43791 374 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 CTNNA1P35221 906 aaKnown RBP16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 KSR1Q8IVT5 923 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 ARFGAP2Q8N6H7 521 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 EYA4O95677 639 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 CCDC127Q96BQ5 260 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 DNAJC12Q9UKB3 198 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 MYH8P13535 1937 aa16.3■□□□□ 0.2
UBE2D4-201ENST00000222402 MSH4O15457 936 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 MYZAPP0CAP1 466 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 C10orf76Q5T2E6 689 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 MMGT1Q8N4V1 131 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 SNED1Q8TER0 1413 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 LRP5O75197 1615 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 TBX3O15119 743 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 CASP4P49662 377 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 NNTQ13423 1086 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 GIT2Q14161 759 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 CCDC25Q86WR0 208 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 SYT2Q8N9I0 419 aaPredicted RBP16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
UBE2D4-201ENST00000222402 NAP1L3Q99457 506 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms