RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 CEP63Q96MT8 703 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 DNAJC12Q9UKB3 198 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 USP11P51784 963 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 DDR1Q08345 913 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ARFGAP2Q8N6H7 521 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 PLVAPQ9BX97 442 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ZNF277Q9NRM2 450 aaPredicted RBP14.8□□□□□ -0.04
RAB3D-201ENST00000222120 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ECE1P42892 770 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 GCLMP48507 274 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 LIG3P49916 1009 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
RAB3D-201ENST00000222120 UBL4BQ8N7F7 174 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 SUPT20HQ8NEM7 779 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 KCND1Q9NSA2 647 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 DMGDHQ9UI17 866 aaKnown RBP14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 FGRP09769 529 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 CYP11B2P19099 503 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 CYP2C19P33261 490 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 KCNK9Q9NPC2 374 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 RBM12Q9NTZ6 932 aaKnown RBP14.8□□□□□ -0.04
RAB3D-201ENST00000222120 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.8□□□□□ -0.04
RAB3D-201ENST00000222120 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 STK24Q9Y6E0 443 aa14.8□□□□□ -0.04
RAB3D-201ENST00000222120 A0A087X0T9 212 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 RCCD1A6NED2 376 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 FAM228BP0C875 321 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PDCLQ13371 301 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PPP1R18Q6NYC8 613 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 FBXO28Q9NVF7 368 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 ASIC3Q9UHC3 531 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 ATP8A1Q9Y2Q0 1164 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 BZW2Q9Y6E2 419 aaKnown RBP14.79□□□□□ -0.04
RAB3D-201ENST00000222120 LRRIQ3A6PVS8 624 aaPredicted RBP14.79□□□□□ -0.04
RAB3D-201ENST00000222120 FERP16591 822 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 SHMT1P34896 483 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PEX3P56589 373 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 TRAPPC11Q7Z392 1133 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
RAB3D-201ENST00000222120 RRP15Q9Y3B9 282 aaKnown RBP14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PGRMC1O00264 195 aaKnown RBP14.79□□□□□ -0.04
RAB3D-201ENST00000222120 IL1R1P14778 569 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 NNTQ13423 1086 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 WDR59Q6PJI9 974 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 ACER1Q8TDN7 264 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 FAM20AQ96MK3 541 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PACSIN1Q9BY11 444 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 PRR12Q9ULL5 1215 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 L1RE1Q9UN81 338 aa14.79□□□□□ -0.04
RAB3D-201ENST00000222120 ZBED4O75132 1171 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 FLAD1Q8NFF5 587 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 POMGNT1Q8WZA1 660 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 ORC2Q13416 577 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 CERS5Q8N5B7 392 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 SH2D3CQ8N5H7 860 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 GIMAP7Q8NHV1 300 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 CHORDC1Q9UHD1 332 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 FGGP02679 453 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 UCHL3P15374 230 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 GAP43P17677 238 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 CASP4P49662 377 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 PLTPP55058 493 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 WDR44Q5JSH3 913 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 WDR11Q9BZH6 1224 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 RAVER2Q9HCJ3 691 aaKnown RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 HSPA1LP34931 641 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
RAB3D-201ENST00000222120 PRMT6Q96LA8 375 aaPredicted RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
RAB3D-201ENST00000222120 ANKRD62A6NC57 917 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 IPO5O00410 1097 aaKnown RBP14.77□□□□□ -0.04
RAB3D-201ENST00000222120 VIMP08670 466 aaKnown RBP14.77□□□□□ -0.04
RAB3D-201ENST00000222120 PTK2Q05397 1052 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 SLC27A3Q5K4L6 730 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 CCNI2Q6ZMN8 369 aaPredicted RBP14.77□□□□□ -0.04
RAB3D-201ENST00000222120 HDAC7Q8WUI4 952 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 MAGOHBQ96A72 148 aaKnown RBP14.77□□□□□ -0.04
RAB3D-201ENST00000222120 IFT74Q96LB3 600 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 IMPG2Q9BZV3 1241 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 SYNCQ9H7C4 482 aa14.77□□□□□ -0.04
RAB3D-201ENST00000222120 TYW1Q9NV66 732 aaKnown RBP14.77□□□□□ -0.04
RAB3D-201ENST00000222120 MYH2Q9UKX2 1941 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 HHIPL2Q6UWX4 724 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 MGARPQ8TDB4 240 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 GOLGA8KD6RF30 607 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 HNRNPDLO14979 420 aaKnown RBP14.77□□□□□ -0.05
RAB3D-201ENST00000222120 ZRANB2O95218 330 aaKnown RBP eCLIP14.77□□□□□ -0.05
RAB3D-201ENST00000222120 INPP5BP32019 993 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 PBX1P40424 430 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 SLC18A3Q16572 532 aa14.77□□□□□ -0.05
RAB3D-201ENST00000222120 PADI6Q6TGC4 694 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms