RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 SLC9A1P19634 815 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 ITIH3Q06033 890 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 SLC18A3Q16572 532 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 PTPROQ16827 1216 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 RNF10Q8N5U6 811 aaKnown RBP16.77■□□□□ 0.28
TGFB1-201ENST00000221930 CYP2W1Q8TAV3 490 aa16.77■□□□□ 0.28
TGFB1-201ENST00000221930 COL2A1P02458 1487 aaPredicted RBP16.77■□□□□ 0.27
TGFB1-201ENST00000221930 FAM86B1E9PN63 330 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 CETN3O15182 167 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 GNA14O95837 355 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 SPIRE1Q08AE8 756 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.27
TGFB1-201ENST00000221930 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 KIF3CO14782 793 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
TGFB1-201ENST00000221930 GIT2Q14161 759 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 TSEN2Q8NCE0 465 aaKnown RBP16.76■□□□□ 0.27
TGFB1-201ENST00000221930 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
TGFB1-201ENST00000221930 REEP2Q9BRK0 252 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 NUCKS1Q9H1E3 243 aaKnown RBP16.76■□□□□ 0.27
TGFB1-201ENST00000221930 GOLPH3Q9H4A6 298 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 GLI1P08151 1106 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 MMP10P09238 476 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 MARSP56192 900 aaKnown RBP16.76■□□□□ 0.27
TGFB1-201ENST00000221930 NAB2Q15742 525 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
TGFB1-201ENST00000221930 CYP3A7-CYP3A51PA0A087WV96 503 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 SPATA31C1P0DKV0 1188 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 MYBP10242 640 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 CYP3A7P24462 503 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 HOXD13P35453 343 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 PTK2Q05397 1052 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 KCNA1Q09470 495 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 DCAF17Q5H9S7 520 aaPredicted RBP16.75■□□□□ 0.27
TGFB1-201ENST00000221930 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 GANQ9H2C0 597 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 FRMD3A2A2Y4 597 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 ANKRD65E5RJM6 399 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 F5H6K3 240 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 ICA1Q05084 483 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 KLRC3Q07444 240 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 ASIC2Q16515 512 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 KCTD19Q17RG1 926 aaPredicted RBP16.75■□□□□ 0.27
TGFB1-201ENST00000221930 SH3BP5LQ7L8J4 393 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 EHD4Q9H223 541 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 DNM3Q9UQ16 869 aa16.75■□□□□ 0.27
TGFB1-201ENST00000221930 SFI1A8K8P3 1242 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 IFT81Q8WYA0 676 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 LENG9Q96B70 501 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 NAP1L4Q99733 375 aaKnown RBP16.74■□□□□ 0.27
TGFB1-201ENST00000221930 IKZF4Q9H2S9 585 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 AIPL1Q9NZN9 384 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
TGFB1-201ENST00000221930 KIF13BQ9NQT8 1826 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
TGFB1-201ENST00000221930 EDRF1Q3B7T1 1238 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 NBPF9Q3BBW0 867 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 C11orf91Q3C1V1 193 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 TCERG1LQ5VWI1 586 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 SPICE1Q8N0Z3 855 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 BHMT2Q9H2M3 363 aa16.74■□□□□ 0.27
TGFB1-201ENST00000221930 SPDYE3A6NKU9 549 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 AKAP3O75969 853 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
TGFB1-201ENST00000221930 EPHB4P54760 987 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
TGFB1-201ENST00000221930 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 FAM76AQ8TAV0 307 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 MKL1Q969V6 931 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 AMNQ9BXJ7 453 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 RABEP2Q9H5N1 569 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 EPB41L5Q9HCM4 733 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 LUC7LQ9NQ29 371 aaKnown RBP16.73■□□□□ 0.27
TGFB1-201ENST00000221930 RGL1Q9NZL6 768 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 NFU1Q9UMS0 254 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 PITPNM2Q9BZ72 1349 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 FAM170AA1A519 330 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 GRID2IPA4D2P6 1211 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 H0YIN7 160 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 CLIC2O15247 247 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 UCHL3P15374 230 aa16.73■□□□□ 0.27
TGFB1-201ENST00000221930 RPA1P27694 616 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms