RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 EDRF1Q3B7T1 1238 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 PGRMC1O00264 195 aaKnown RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 KRIT1O00522 736 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 HOXD13P35453 343 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 PEX26Q7Z412 305 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 CATSPER3Q86XQ3 398 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 TPCN2Q8NHX9 752 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 PLCB1Q9NQ66 1216 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 POLLQ9UGP5 575 aa20.23■□□□□ 0.83
CACTIN-201ENST00000221899 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
CACTIN-201ENST00000221899 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 BACH1O14867 736 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 CLIC2O15247 247 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 AKAP3O75969 853 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 CASP4P49662 377 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 IFT88Q13099 833 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 SUGP1Q8IWZ8 645 aaKnown RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 SLF2Q8IX21 1173 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 PBKQ96KB5 322 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 REEP2Q9BRK0 252 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 ANO3Q9BYT9 981 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 RSPH10B2B2RC85 870 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 DAPK3O43293 454 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 RSPH10BP0C881 870 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 TMOD1P28289 359 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 MNAT1P51948 309 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 SNAP25P60880 206 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 ZNF844Q08AG5 666 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 GIT2Q14161 759 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 PRR16Q569H4 304 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 ZC3H3Q8IXZ2 948 aaKnown RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 FAM163AQ96GL9 167 aaPredicted RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 CELF4Q9BZC1 486 aaKnown RBP20.22■□□□□ 0.83
CACTIN-201ENST00000221899 IKZF4Q9H2S9 585 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 FBXL5Q9UKA1 691 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 PLIN4Q96Q06 1357 aa20.22■□□□□ 0.83
CACTIN-201ENST00000221899 ARFGEF1Q9Y6D6 1849 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 RIMBP2O15034 1052 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 KCNA1Q09470 495 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 KNOP1Q1ED39 458 aaKnown RBP20.21■□□□□ 0.83
CACTIN-201ENST00000221899 DAAM2Q86T65 1068 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 ACTRT1Q8TDG2 376 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 SERPINB13Q9UIV8 391 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 H0YGN5 161 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 CYP4A11Q02928 519 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 SHROOM1Q2M3G4 852 aaPredicted RBP20.21■□□□□ 0.83
CACTIN-201ENST00000221899 QRICH1Q2TAL8 776 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
CACTIN-201ENST00000221899 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.21■□□□□ 0.832e-6■■■□□ 16.4
CACTIN-201ENST00000221899 MXD3Q9BW11 206 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 TRIM31Q9BZY9 425 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 DPH5Q9H2P9 285 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 KCNMB3Q9NPA1 279 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 NFS1Q9Y697 457 aa20.21■□□□□ 0.83
CACTIN-201ENST00000221899 BTNL10A8MVZ5 291 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 TTI1O43156 1089 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 CUL1Q13616 776 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 ODF2Q5BJF6 829 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 MCTP2Q6DN12 878 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 PRR5LQ6MZQ0 368 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 PCDHB13Q9Y5F0 798 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 FRMD3A2A2Y4 597 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 FLOT1O75955 427 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 GFPT2O94808 682 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 TAL1P17542 331 aaPredicted RBP20.2■□□□□ 0.82
CACTIN-201ENST00000221899 IFI16Q16666 785 aaKnown RBP20.2■□□□□ 0.82
CACTIN-201ENST00000221899 C10orf76Q5T2E6 689 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 EMC10Q5UCC4 262 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 FRMD5Q7Z6J6 570 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 LRRC4CQ9HCJ2 640 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
CACTIN-201ENST00000221899 SFI1A8K8P3 1242 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 SHMT1P34896 483 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 FNTAP49354 379 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 SCNN1DP51172 638 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 EPHA7Q15375 998 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 MICALCLQ6ZW33 695 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 CNPY4Q8N129 248 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 LRRC45Q96CN5 670 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 FAM196BA6NMK8 535 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 FAM107AO95990 144 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 TRAPPC3LQ5T215 181 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 GPATCH4Q5T3I0 446 aaKnown RBP20.19■□□□□ 0.82
CACTIN-201ENST00000221899 ADAT2Q7Z6V5 191 aaKnown RBP20.19■□□□□ 0.82
CACTIN-201ENST00000221899 TBC1D16Q8TBP0 767 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 P2RX7Q99572 595 aaKnown RBP20.19■□□□□ 0.82
CACTIN-201ENST00000221899 TRAF3IP3Q9Y228 551 aa20.19■□□□□ 0.82
CACTIN-201ENST00000221899 BZW2Q9Y6E2 419 aaKnown RBP20.19■□□□□ 0.82
CACTIN-201ENST00000221899 DCDC2CA8MYV0 355 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 DDX3XO00571 662 aaKnown RBP eCLIP20.18■□□□□ 0.826e-12■■□□□ 13.4
CACTIN-201ENST00000221899 CES2O00748 559 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 H2AFZP0C0S5 128 aa20.18■□□□□ 0.82
CACTIN-201ENST00000221899 ZBTB48P10074 688 aaPredicted RBP20.18■□□□□ 0.82
CACTIN-201ENST00000221899 LRIG3Q6UXM1 1119 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms