RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SPATA31C1P0DKV0 1188 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 CAP2P40123 477 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 USP11P51784 963 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 NAP1L1P55209 391 aaKnown RBP10.99□□□□□ -0.65
USP11-201ENST00000218348 NOL9Q5SY16 702 aaKnown RBP10.99□□□□□ -0.65
USP11-201ENST00000218348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.99□□□□□ -0.658e-14■■□□□ 11.4
USP11-201ENST00000218348 SCFD1Q8WVM8 642 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
USP11-201ENST00000218348 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 CEP350Q5VT06 3117 aa10.99□□□□□ -0.65
USP11-201ENST00000218348 FLOT1O75955 427 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 ACTN1P12814 892 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 EIF2AK2P19525 551 aaKnown RBP10.98□□□□□ -0.65
USP11-201ENST00000218348 NMT1P30419 496 aaKnown RBP10.98□□□□□ -0.65
USP11-201ENST00000218348 ADAM9Q13443 819 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 FAM114A1Q8IWE2 563 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 IL31RAQ8NI17 732 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 CDCA5Q96FF9 252 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 KCND1Q9NSA2 647 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 GAS7O60861 476 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 IPO7O95373 1038 aaKnown RBP10.98□□□□□ -0.65
USP11-201ENST00000218348 GUF1Q8N442 669 aaKnown RBP10.98□□□□□ -0.65
USP11-201ENST00000218348 KLRG1Q96E93 195 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 CCDC42Q96M95 316 aa10.98□□□□□ -0.65
USP11-201ENST00000218348 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
USP11-201ENST00000218348 LRRC53A6NM62 1247 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 AKR1B10O60218 316 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 NR2F2P24468 414 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 SREBF1P36956 1147 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 ARHGAP25P42331 645 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 SSR1P43307 286 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 HERVK_113P62684 666 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 SPIRE1Q08AE8 756 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 SPP2Q13103 211 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 MTMR2Q13614 643 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 LDLRAD1Q5T700 205 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 TTC19Q6DKK2 380 aaPredicted RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 SLFN12Q8IYM2 578 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 MYCT1Q8N699 235 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 WNK4Q96J92 1243 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 PLEKHA4Q9H4M7 779 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 CAPN11Q9UMQ6 739 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 ITIH6Q6UXX5 1313 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 CTAGE9A4FU28 777 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 PNMA6AP0CW24 399 aaPredicted RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 CLCN6P51797 869 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 POLR2FP61218 127 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 NEK11Q8NG66 645 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 ERMNQ8TAM6 284 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 CHURC1Q8WUH1 139 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 ZNF577Q9BSK1 485 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP11-201ENST00000218348 LSM14BQ9BX40 385 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 NAA15Q9BXJ9 866 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 WDR11Q9BZH6 1224 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 GOLGA6L9A6NEM1 432 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 TBCAO75347 108 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 CASP4P49662 377 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 JAKMIP2Q96AA8 810 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 MLXIPQ9HAP2 919 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 COL20A1Q9P218 1284 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 WRAP73Q9P2S5 460 aaPredicted RBP10.97□□□□□ -0.65
USP11-201ENST00000218348 RABGAP1Q9Y3P9 1069 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 MRFAP1Q9Y605 127 aa10.97□□□□□ -0.65
USP11-201ENST00000218348 TADA3O75528 432 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 CXCR5P32302 372 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 SLC12A3P55017 1021 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 FKBP3Q00688 224 aaKnown RBP10.96□□□□□ -0.65
USP11-201ENST00000218348 GIT2Q14161 759 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 COG2Q14746 738 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
USP11-201ENST00000218348 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
USP11-201ENST00000218348 RPAINQ86UA6 219 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 ZNF446Q9NWS9 450 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP11-201ENST00000218348 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 KDM3AQ9Y4C1 1321 aa10.96□□□□□ -0.65
USP11-201ENST00000218348 MYO1CO00159 1063 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 ZNF185O15231 689 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 BUB1O43683 1085 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 ZMYND10O75800 440 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 MATR3P43243 847 aaKnown RBP eCLIP10.96□□□□□ -0.66
USP11-201ENST00000218348 GFPT1Q06210 699 aaPredicted RBP10.96□□□□□ -0.66
USP11-201ENST00000218348 MOGSQ13724 837 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 MAN2A1Q16706 1144 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 GDAP1L1Q96MZ0 367 aa10.96□□□□□ -0.66
USP11-201ENST00000218348 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms