RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 F8W031 263 aaPredicted RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 MEIS2O14770 477 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 RAD51CO43502 376 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 FLOT1O75955 427 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
SRP54-201ENST00000216774 CDC42EP5Q6NZY7 148 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 FAM20AQ96MK3 541 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 REEP2Q9BRK0 252 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 ISCUQ9H1K1 167 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 NENFQ9UMX5 172 aa14.57□□□□□ -0.08
SRP54-201ENST00000216774 ATXN2Q99700 1313 aaKnown RBP14.56□□□□□ -0.08
SRP54-201ENST00000216774 KCNK3O14649 394 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 ACTN1P12814 892 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 SLC9A1P19634 815 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 RPL13P26373 211 aaKnown RBP14.56□□□□□ -0.08
SRP54-201ENST00000216774 HOXD13P35453 343 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 EPHA7Q15375 998 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 ENOX2Q16206 610 aaKnown RBP14.56□□□□□ -0.08
SRP54-201ENST00000216774 TADA2BQ86TJ2 420 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 VPS36Q86VN1 386 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 KCTD17Q8N5Z5 321 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 SCFD2Q8WU76 684 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 TYW1Q9NV66 732 aaKnown RBP14.56□□□□□ -0.08
SRP54-201ENST00000216774 NYAP2Q9P242 653 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 INTUQ9ULD6 942 aa14.56□□□□□ -0.08
SRP54-201ENST00000216774 A0A0A6YYK5 440 aaPredicted RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 GTPBP10A4D1E9 387 aaKnown RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 HMGB1P1B2RPK0 211 aaPredicted RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 PPEF1O14829 653 aaPredicted RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 SPATA31C1P0DKV0 1188 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 GUCY2FP51841 1108 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 ALKBH5Q6P6C2 394 aaKnown RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 LMBR1Q8WVP7 490 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 TEKT1Q969V4 418 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 FAM169AQ9Y6X4 670 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 PGRMC1O00264 195 aaKnown RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 JAM2P57087 298 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 PABPC4Q13310 644 aaKnown RBP eCLIP14.55□□□□□ -0.081e-8■■□□□ 12.5
SRP54-201ENST00000216774 PRR16Q569H4 304 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 FAM182BQ5T319 152 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 LRIG3Q6UXM1 1119 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 B4GALNT4Q76KP1 1039 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 SPATS2Q86XZ4 545 aaKnown RBP14.55□□□□□ -0.08
SRP54-201ENST00000216774 LENG9Q96B70 501 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 ATP6V1G3Q96LB4 118 aa14.55□□□□□ -0.08
SRP54-201ENST00000216774 BHMG1C9JSJ3 638 aaPredicted RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 ANKRD65E5RJM6 399 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 RIMBP2O15034 1052 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 AKAP3O75969 853 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 NR3C1P04150 777 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SREBF1P36956 1147 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 NOP2P46087 812 aaKnown RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 PSMC6P62333 389 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 PDCLQ13371 301 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 APOBEC3HQ6NTF7 200 aaKnown RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 SLFN11Q7Z7L1 901 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 PACS2Q86VP3 889 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 KLHL7Q8IXQ5 586 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SH2D3CQ8N5H7 860 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 TPCN2Q8NHX9 752 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 AMNQ9BXJ7 453 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 UBR3Q6ZT12 1888 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 ASTN1O14525 1302 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SRRM3A6NNA2 597 aaPredicted RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 CCDC188H7C350 402 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 GFPT2O94808 682 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 EEF2P13639 858 aaKnown RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 NR1D1P20393 614 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 NPEPPSP55786 919 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SKIDA1Q1XH10 827 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 KCTD16Q68DU8 428 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SYCE1Q8N0S2 351 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 SLC35C1Q96A29 364 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRP54-201ENST00000216774 ZC3H12CQ9C0D7 883 aaKnown RBP14.54□□□□□ -0.08
SRP54-201ENST00000216774 SIX2Q9NPC8 291 aa14.54□□□□□ -0.08
SRP54-201ENST00000216774 NDUFAB1O14561 156 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 CEP104O60308 925 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 CIITAP33076 1130 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 RNASE9P60153 205 aaKnown RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 DCAF17Q5H9S7 520 aaPredicted RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 LRRC45Q96CN5 670 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 POLR3CQ9BUI4 534 aaPredicted RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 DNAJC18Q9H819 358 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 OLFML3Q9NRN5 406 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 SUCLA2Q9P2R7 463 aaPredicted RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 GOLGA6L10A6NI86 522 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 SPDYE3A6NKU9 549 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 MEIS1O00470 390 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 TBCAO75347 108 aaKnown RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 H2AFZP0C0S5 128 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 FERP16591 822 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms