RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Ankrd23Q812A3 306 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pde10aQ8CA95 790 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Eps8l1Q8R5F8 716 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Rabgef1Q9JM13 491 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Rtl9Q32KG4 1339 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ccdc24E9PUW8 296 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Krt4P07744 525 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Upf3bQ3ULL6 472 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Fxr1Q61584 677 aaKnown RBP13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Best2Q8BGM5 508 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Champ1Q8K327 802 aaKnown RBP13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 ArpinQ9D0A3 226 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Fem1bQ9Z2G0 627 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Iqcj-Schip1A0A088MLT8 559 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pabpc1lA2A5N3 607 aaKnown RBP13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Schip1P0DPB4 484 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Mcl1P97287 331 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Trim38Q5SZ99 471 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Skiv2lQ6NZR5 1244 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ankrd13aQ80UP5 588 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Zfp317Q8C0Q5 607 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Mrpl50Q8VDT9 159 aaKnown RBP13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Arl8aQ8VEH3 186 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Zswim7Q9CWQ2 152 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Abcb5B5X0E4 1255 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Gm3248K7N721 186 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Mup5P11591 180 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Lig4Q8BTF7 911 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 EpgnQ924X1 152 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Nde1Q9CZA6 344 aa13.31□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Arhgap6O54834 987 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ess2O70279 479 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Avpr1aQ62463 423 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 PigsQ6PD26 555 aaKnown RBP13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Prpf6Q91YR7 941 aaKnown RBP13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ttc13A0A1L1SSC7 844 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ppp2r2aQ6P1F6 447 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Rrp1bQ91YK2 724 aaKnown RBP13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Tlr3Q99MB1 905 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Myo1cQ9WTI7 1063 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Mybl1P51960 751 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ect2Q07139 913 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Yipf3Q3UDR8 347 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Mtmr10Q7TPM9 771 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Lyve1Q8BHC0 318 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Usp44Q8C2S0 711 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Trim54Q9ERP3 366 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Zranb2Q9R020 330 aaKnown RBP13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 MypnQ5DTJ9 1315 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ces1eQ64176 562 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Sv2cQ69ZS6 727 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Tigd4Q8BUZ3 513 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Terb1Q8C0V1 768 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ephb1Q8CBF3 984 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Cnot8Q9D8X5 292 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pold3Q9EQ28 462 aa13.3□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Unc13aQ4KUS2 1712 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Plch2A2AP18 1501 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Defb15Q8R2I5 79 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 WaslQ91YD9 501 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Eaf2Q91ZD6 262 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Afg3l1Q920A7 789 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 KynuQ9CXF0 464 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Antxr1Q9CZ52 562 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ttc17E9PVB5 1198 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 SfnO70456 248 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Gm136Q3V037 328 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Dennd2cQ6P9P8 914 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Baiap3Q80TT2 1134 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Twf2Q9Z0P5 349 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 1700011I03RikE9PYL8 271 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Raph1F2Z3U3 1266 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pla2g4aP47713 748 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Nek1P51954 1203 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Znf148Q61624 794 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ino80dQ66JY2 873 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Fkbp6Q91XW8 327 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Snx24Q9CRB0 169 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Lbhd1A0A087WPA0 259 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ccdc62E9PVD1 701 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Sept1P42209 366 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Foxp2P58463 714 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 RnaselQ05921 735 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Lca5Q80ST9 704 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Rps6kc1Q8BLK9 1056 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Carmil3Q3UFQ8 1375 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 E2f6O54917 272 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Abcb1bP06795 1276 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pdcd2P46718 343 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Olfm3P63056 478 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Fam83bQ0VBM2 1012 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 FcgrtQ61559 365 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Zfp91Q62511 572 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Atp6v0d2Q80SY3 350 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Coa7Q921H9 231 aa13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 St13Q99L47 371 aaKnown RBP13.29□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Lmo7E9PYF4 1699 aaKnown RBP13.28□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Pfkfb3A7UAK5 555 aa13.28□□□□□ -0.28
Ssh1-202ENSMUST00000112298 Ifi207E9Q3L4 978 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms