RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Plppr4Q7TME0 766 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 ClmnQ8C5W0 1052 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm5591Q8CDK1 855 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Cep57l1Q8VDS7 400 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Pcdhb12Q91Y07 789 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 NenfQ9CQ45 171 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Asah2Q9JHE3 756 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Lmbr1Q9JIT0 490 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 PigoQ9JJI6 1093 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Fut2Q9JL27 347 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Mrvi1Q9WUX5 899 aaKnown RBP13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Eif2ak1Q9Z2R9 619 aa13.67□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Col4a6B1AVK5 1691 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 TriobpQ99KW3 2014 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Gm43738A0A0G2JEA5 862 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 A0A0U1RNP2 1173 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 PrkceP16054 737 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Cd86P42082 309 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Atp6v1dP57746 247 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Wdr5P61965 334 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Casp7P97864 303 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Mettl14Q3UIK4 456 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Crtc1Q68ED7 630 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ccdc82Q6PG04 518 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Raver2Q7TPD6 673 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Actn1Q7TPR4 892 aaKnown RBP13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Slc2a12Q8BFW9 622 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 4933409G03RikQ8C5U0 320 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tspyl4Q8VD63 406 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Rpn1Q91YQ5 608 aaKnown RBP13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tmod3Q9JHJ0 352 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Oaz3Q9R109 243 aa13.66□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ttll8A4Q9F1 832 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ptchd4B9EKX1 904 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Arhgef26D3YYY8 869 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Zfp213E9QAW0 468 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ccng2O08918 344 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Psmc5P62196 406 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Dlg3P70175 849 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Plekha7Q3UIL6 1118 aaKnown RBP13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 C87499Q3UX49 493 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Xkr4Q5GH67 647 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Cyp4f39Q8BGU0 532 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Smarcal1Q8BJL0 910 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 ZwintQ9CQU5 252 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Bloc1s2Q9CWG9 143 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Tmem206Q9D771 350 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Add3Q9QYB5 706 aaKnown RBP13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Ralgapa2A3KGS3 1872 aa13.65□□□□□ -0.22
Ccdc28a-202ENSMUST00000080860 Fam205aA2APU8 1308 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 2610008E11RikG3X964 669 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Gm3164L7N2B9 238 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Gm3264L7N2C5 238 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Api5O35841 504 aaKnown RBP13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Cd70O55237 195 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Col9a2Q07643 688 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Echdc2Q3TLP5 296 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Nlrp2Q4PLS0 1046 aaKnown RBP13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Spdye4aQ5IBH6 268 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Trak2Q6P9N8 913 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Arhgef19Q8BWA8 802 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 4931406P16RikQ8C5X1 1059 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Mettl5Q8K1A0 209 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Znf445Q8R2V3 986 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Eml3Q8VC03 897 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Olfr397Q8VEZ6 315 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Cwh43Q91YL7 699 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Rab30Q923S9 203 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 PrelpQ9JK53 378 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Extl3Q9WVL6 918 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Fxr2Q9WVR4 673 aaKnown RBP13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Mtmr1Q9Z2C4 669 aa13.64□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Bcat1P24288 386 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Rnf19aP50636 840 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 MafP54843 370 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 CiitaP79621 1155 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Epha2Q03145 977 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Gse1Q3U3C9 1213 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Celf4Q7TSY6 486 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Asnsd1Q8BFS9 627 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Zfp120Q8BZW4 436 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Pnma1Q8C1C8 353 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Ago3Q8CJF9 860 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Ier5lQ99J55 406 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Rtfdc1Q99K95 307 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Tbc1d15Q9CXF4 671 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Ttc9bQ9D6E4 239 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Cd274Q9EP73 290 aa13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Wdr46Q9Z0H1 622 aaKnown RBP13.63□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Tbc1d2B1AVH7 922 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Cer1O55233 272 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Bbs9Q811G0 885 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 EtnpplQ8BWU8 499 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Sept8Q8CHH9 429 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Adcy3Q8VHH7 1145 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Mmtag2Q99LX5 260 aaKnown RBP13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 AacsQ9D2R0 672 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 NapaQ9DB05 295 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 GdaQ9R111 454 aa13.62□□□□□ -0.23
Ccdc28a-202ENSMUST00000080860 Tnfsf13bQ9WU72 309 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms