RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Klra9Q2TJJ8 266 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Six2Q62232 296 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Ces1eQ64176 562 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Q91Z58 1206 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Spdl1Q923A2 608 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Cabp5Q9JLK3 173 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Kcnj4P52189 445 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Rnf216P58283 853 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Rnf40Q3U319 1001 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Scarf1Q5ND28 820 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Pacsin1Q61644 441 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Mcf2lQ64096 1149 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Gm2163Q6PCY5 473 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Calhm4Q8CE93 315 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Enox2Q8R0Z2 598 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Nup58Q8R332 587 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Slc25a38Q91XD8 326 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Ergic2Q9CR89 377 aa27.1■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Sin3bQ62141 1098 aa27.09■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Tlr11Q6R5P0 926 aa27.09■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Cyp26b1Q811W2 512 aa27.09■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Matr3Q8K310 846 aaKnown RBP27.09■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Nmt1O70310 496 aaKnown RBP27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Rbm46P86049 533 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Kdm7aQ3UWM4 940 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 NfrkbQ6PIJ4 1296 aaKnown RBP27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Galnt15Q9D2N8 638 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Tjp2Q9Z0U1 1167 aaKnown RBP27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 P4hbP09103 509 aaKnown RBP27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Eps15P42567 897 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Fgfr4Q03142 799 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Secisbp2lQ6A098 1086 aaKnown RBP27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Exoc3Q6KAR6 755 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Il17cQ8K4C5 194 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Ciapin1Q8WTY4 309 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Grtp1Q9D3N8 359 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Fut8Q9WTS2 575 aa27.08■■□□□ 1.93
Cldnd1-201ENSMUST00000023426 Eddm13E9Q7F5 164 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Folh1O35409 752 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 D1Pas1P16381 660 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 KhsrpQ3U0V1 748 aaKnown RBP27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Grik5Q61626 979 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 HrQ61645 1182 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Naa15Q80UM3 865 aaKnown RBP27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Yars2Q8BYL4 472 aaKnown RBP27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Kdm4bQ91VY5 1086 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Rit2P70425 217 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Brd9Q3UQU0 596 aaKnown RBP27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ift20Q61025 132 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Lrig3Q6P1C6 1117 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ccdc148Q6P5U8 527 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Rnf34Q99KR6 376 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Fthl17aQ9DAX0 182 aa27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Cse1lQ9ERK4 971 aaKnown RBP27.07■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Fyb2A2A995 729 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Idh1O88844 414 aaKnown RBP27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Cd44P15379 778 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Rfc1P35601 1131 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 P4ha1Q60715 534 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 KaznQ69ZS8 779 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Cfap100Q80VN0 613 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Psmd5Q8BJY1 504 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Trim47Q8C0E3 641 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gprc5cQ8K3J9 440 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 IntS13Q8QZV7 732 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Prpf4Q9DAW6 521 aaKnown RBP27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 CenphQ9QYM8 241 aa27.06■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Hoxc13P50207 328 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Erbb2P70424 1256 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gm5935Q497S0 212 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Cct8l1Q80YT3 562 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Vps52Q8C754 723 aaKnown RBP27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gdap1l1Q8VE33 370 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ttc6G3UYY4 1857 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gm38392E9Q2A2 434 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Magea4F2Z493 315 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Lrrc6O88978 473 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Rps6ka1P18653 724 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 ArP19091 899 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Rapgef1Q3UHC1 1224 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Znf354cQ571J5 560 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 F13a1Q8BH61 732 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 GrapQ9CX99 217 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Lztfl1Q9JHQ5 299 aa27.05■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Atrnl1Q6A051 1378 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Scn3aA2ASI5 1947 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Vwa3aQ3UVV9 1148 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Znf652Q5DU09 608 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Krt15Q61414 452 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Fmnl3Q6ZPF4 1028 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ctage5Q8R311 779 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Scgb2b12S4R2L0 112 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Zfp408H7BX78 710 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ddx3xQ62167 662 aaKnown RBP27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Ppp2r5aQ6PD03 486 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 E2f7Q6S7F2 904 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gprasp2Q8BUY8 826 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 VillQ91YD6 859 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Gbp7Q91Z40 638 aa27.04■■□□□ 1.92
Cldnd1-201ENSMUST00000023426 Cwc15Q9JHS9 229 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms