RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 ARHGAP29Q52LW3 1261 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 IL31Q6EBC2 164 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 RASSF3Q86WH2 238 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 FBXO41Q8TF61 875 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 SARGQ9BW04 601 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 JAM3Q9BX67 310 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 MS4A5Q9H3V2 200 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 SMURF1Q9HCE7 757 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 TOMM22Q9NS69 142 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 BTG4Q9NY30 223 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 STK17AQ9UEE5 414 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 NOC2LQ9Y3T9 749 aaKnown RBP8.46□□□□□ -1.06
SCARB2-224ENST00000640880 SPO11Q9Y5K1 396 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 A2MP01023 1474 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 EIF2AK4Q9P2K8 1649 aaKnown RBP8.45□□□□□ -1.06
SCARB2-224ENST00000640880 C7orf72A4D263 438 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 TRIM75PA6NK02 468 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 KCNK3O14649 394 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 DHX15O43143 795 aaKnown RBP8.45□□□□□ -1.06
SCARB2-224ENST00000640880 TBC1D8O95759 1140 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 LSP1P33241 339 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 GTF2A2P52657 109 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 PHC1P78364 1004 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 GBX1Q14549 363 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 GRM3Q14832 879 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 LONRF3Q496Y0 759 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 ZAR1Q86SH2 424 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 KIAA1958Q8N8K9 716 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 PJA1Q8NG27 643 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 AIFM3Q96NN9 605 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
SCARB2-224ENST00000640880 ELF4Q99607 663 aaPredicted RBP8.45□□□□□ -1.06
SCARB2-224ENST00000640880 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 INVSQ9Y283 1065 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 RIMS1Q86UR5 1692 aaKnown RBP8.45□□□□□ -1.06
SCARB2-224ENST00000640880 ANKRD30AQ9BXX3 1397 aa8.45□□□□□ -1.06
SCARB2-224ENST00000640880 KLHL33A6NCF5 533 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 ERC2O15083 957 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 NPHS1O60500 1241 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 ASGR2P07307 311 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 GNAT1P11488 350 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 VCAM1P19320 739 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 NEK3P51956 506 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 HTRA3P83110 453 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 SMAD3P84022 425 aaKnown RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 PICALMQ13492 652 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 ADGRE1Q14246 886 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 ACAP2Q15057 778 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 SMAD2Q15796 467 aaKnown RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 C4orf46Q504U0 113 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 C10orf62Q5T681 223 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 FSTL4Q6MZW2 842 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 CYP2R1Q6VVX0 501 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 NLRP10Q86W26 655 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 PCIF1Q9H4Z3 704 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 DDX20Q9UHI6 824 aaKnown RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 FRMPD2Q68DX3 1309 aaPredicted RBP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.44□□□□□ -1.06
SCARB2-224ENST00000640880 AGLP35573 1532 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
SCARB2-224ENST00000640880 MADDQ8WXG6 1647 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 IFRD1O00458 451 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-224ENST00000640880 DVL2O14641 736 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 AMY2AP04746 511 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 AMY2BP19961 511 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ENDOUP21128 410 aaKnown RBP8.43□□□□□ -1.06
SCARB2-224ENST00000640880 LTKP29376 864 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 GPR3P46089 330 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 GPR19Q15760 415 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ZPBP2Q6X784 338 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ARHGAP36Q6ZRI8 547 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ARHGAP27Q6ZUM4 889 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ZNF765Q7L2R6 523 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 PTRH1Q86Y79 214 aaKnown RBP8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ZNF610Q8N9Z0 462 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 LMBR1Q8WVP7 490 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 DPF3Q92784 378 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 TMEM169Q96HH4 297 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 FAM83CQ9BQN1 747 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 SAP30BPQ9UHR5 308 aaKnown RBP8.43□□□□□ -1.06
SCARB2-224ENST00000640880 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ABCC5O15440 1437 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 SIGLEC1Q9BZZ2 1709 aa8.43□□□□□ -1.06
SCARB2-224ENST00000640880 WTIPA6NIX2 430 aaPredicted RBP8.42□□□□□ -1.06
SCARB2-224ENST00000640880 FAM170BA6NMN3 283 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 H3BS24 57 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 COL6A2P12110 1019 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 HSPA6P17066 643 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 KIF11P52732 1056 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 DHX8Q14562 1220 aaKnown RBP8.42□□□□□ -1.06
SCARB2-224ENST00000640880 NKPD1Q17RQ9 610 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 GAB4Q2WGN9 574 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 COBLL1Q53SF7 1204 aa8.42□□□□□ -1.06
SCARB2-224ENST00000640880 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms