RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ATG7O95352 703 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 IGFBP4P22692 258 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 STAT5BP51692 787 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 NLRP5P59047 1200 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 FAM26DQ5JW98 314 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 RASGRP4Q8TDF6 673 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 LARP6Q9BRS8 491 aaKnown RBP28.66■■■□□ 2.18
VEGFA-232ENST00000640653 TRPC6Q9Y210 931 aa28.66■■■□□ 2.18
VEGFA-232ENST00000640653 MBLAC1A4D2B0 266 aaPredicted RBP28.65■■■□□ 2.18
VEGFA-232ENST00000640653 DDX39AO00148 427 aaKnown RBP28.65■■■□□ 2.18
VEGFA-232ENST00000640653 IPO5O00410 1097 aaKnown RBP28.65■■■□□ 2.18
VEGFA-232ENST00000640653 EIF5BO60841 1220 aaKnown RBP28.65■■■□□ 2.18
VEGFA-232ENST00000640653 GJB5O95377 273 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 DEXIO95424 95 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 RPLP2P05387 115 aaKnown RBP28.65■■■□□ 2.18
VEGFA-232ENST00000640653 SLC26A2P50443 739 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 ANAPC15P60006 121 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 IGBP1P78318 339 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 STK3Q13188 491 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 ADGRE1Q14246 886 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 RUFY4Q6ZNE9 571 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 ZNF577Q9BSK1 485 aa28.65■■■□□ 2.18
VEGFA-232ENST00000640653 AMHP03971 560 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 INSRRP14616 1297 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 TAP1Q03518 808 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 TMCO2Q7Z6W1 182 aaPredicted RBP28.64■■■□□ 2.18
VEGFA-232ENST00000640653 APBB2Q92870 758 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 RAD9AQ99638 391 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 TBC1D22BQ9NU19 505 aa28.64■■■□□ 2.18
VEGFA-232ENST00000640653 EYSQ5T1H1 3165 aa28.64■■■□□ 2.17
VEGFA-232ENST00000640653 DLL1O00548 723 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 CCNE2O96020 404 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 CIITAP33076 1130 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 PLCB4Q15147 1175 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 MARCH8Q5T0T0 291 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 FAM160B1Q5W0V3 765 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 TCEAL9Q9UHQ7 104 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 CHD9Q3L8U1 2897 aa28.63■■■□□ 2.17
VEGFA-232ENST00000640653 BACH1O14867 736 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 DHX15O43143 795 aaKnown RBP28.62■■■□□ 2.17
VEGFA-232ENST00000640653 MIS18BP1Q6P0N0 1132 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 ABHD15Q6UXT9 468 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.62■■■□□ 2.175e-35■■■□□ 16.9
VEGFA-232ENST00000640653 FAM177A1Q8N128 213 aaPredicted RBP28.62■■■□□ 2.17
VEGFA-232ENST00000640653 C22orf23Q9BZE7 217 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 CERS4Q9HA82 394 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 PTPRSQ13332 1948 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 KAT6AQ92794 2004 aa28.62■■■□□ 2.17
VEGFA-232ENST00000640653 IGKV6D-21A0A0A0MT36 114 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 POTEB3A0JP26 581 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 CDKL5O76039 1030 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 CHRNA1P02708 482 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 MKRN4PQ13434 485 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-232ENST00000640653 PRR16Q569H4 304 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 POTEBQ6S5H4 581 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 MYOCDQ8IZQ8 938 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 USP38Q8NB14 1042 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 DNAJB3Q8WWF6 145 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 PPM1EQ8WY54 764 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 IFIH1Q9BYX4 1025 aaKnown RBP28.61■■■□□ 2.17
VEGFA-232ENST00000640653 PCDHA4Q9UN74 947 aa28.61■■■□□ 2.17
VEGFA-232ENST00000640653 ARHGEF15O94989 841 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 USP11P51784 963 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 MGAT3Q09327 533 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 ZNF746Q6NUN9 644 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-232ENST00000640653 FAM117BQ6P1L5 589 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 ARNTL2Q8WYA1 636 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 OSBPL7Q9BZF2 842 aa28.6■■■□□ 2.17
VEGFA-232ENST00000640653 SLKQ9H2G2 1235 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-232ENST00000640653 LCHNA4D1U4 455 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 KRT76Q01546 638 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 ANKRD1Q15327 319 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 SMAP1Q8IYB5 467 aaPredicted RBP28.59■■■□□ 2.17
VEGFA-232ENST00000640653 UIMC1Q96RL1 719 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 ZNF302Q9NR11 478 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 PCDHA2Q9Y5H9 948 aa28.59■■■□□ 2.17
VEGFA-232ENST00000640653 GTPBP6O43824 516 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-232ENST00000640653 HBP1O60381 514 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 GHRP10912 638 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 SCRN1Q12765 414 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 GALNT17Q6IS24 598 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 PDXDC2PQ6P474 469 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 CCDC60Q8IWA6 550 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-232ENST00000640653 ATP8B4Q8TF62 1192 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 FAM49AQ9H0Q0 323 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-232ENST00000640653 INSL6Q9Y581 213 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 CDY2AQ9Y6F7 541 aa28.58■■■□□ 2.17
VEGFA-232ENST00000640653 UNC80Q8N2C7 3258 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 RBAK-RBAKDNI3L0D1 243 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 MRPS6P82932 125 aaKnown RBP28.57■■■□□ 2.16
VEGFA-232ENST00000640653 IER5Q5VY09 327 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 SWSAP1Q6NVH7 229 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 BLIDQ8IZY5 108 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 DAGLBQ8NCG7 672 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 TRAPPC12Q8WVT3 735 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 LENG9Q96B70 501 aa28.57■■■□□ 2.16
VEGFA-232ENST00000640653 M0QZ92 97 aa28.56■■■□□ 2.16
VEGFA-232ENST00000640653 RFXAPO00287 272 aa28.56■■■□□ 2.16
VEGFA-232ENST00000640653 PFKFB2O60825 505 aa28.56■■■□□ 2.16
VEGFA-232ENST00000640653 CCDC85BQ15834 202 aaPredicted RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms