RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 AFAP1L1Q8TED9 768 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 CHAMP1Q96JM3 812 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 TFIP11Q9UBB9 837 aaKnown RBP14.86□□□□□ -0.03
GTF3A-209ENST00000640289 HDAC6Q9UBN7 1215 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 ZNF215Q9UL58 517 aaPredicted RBP14.86□□□□□ -0.03
GTF3A-209ENST00000640289 ATP11BQ9Y2G3 1177 aa14.86□□□□□ -0.03
GTF3A-209ENST00000640289 LAD1O00515 517 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 PRPHP41219 470 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 RGS19P49795 217 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 CDK7P50613 346 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 HIC1Q14526 733 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 PLCB4Q15147 1175 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 EPHA7Q15375 998 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 C1orf53Q5VUE5 145 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 FAM160B1Q5W0V3 765 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 PLPPR4Q7Z2D5 763 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 TRMT1LQ7Z2T5 733 aaKnown RBP14.85□□□□□ -0.03
GTF3A-209ENST00000640289 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 DYDC2Q96IM9 177 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 ERAP1Q9NZ08 941 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 MAFBQ9Y5Q3 323 aaPredicted RBP14.85□□□□□ -0.03
GTF3A-209ENST00000640289 IGSF9BQ9UPX0 1349 aa14.85□□□□□ -0.03
GTF3A-209ENST00000640289 ZNF862O60290 1169 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 PQBP1O60828 265 aaKnown RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 SMIM10L2AP0DMW4 78 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 SMIM10L2BP0DMW5 78 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 CYP4A11Q02928 519 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 DNM1Q05193 864 aaKnown RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 TMEM266Q2M3C6 531 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 NFRKBQ6P4R8 1299 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 DTHD1Q6ZMT9 781 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 C7orf31Q8N865 590 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 ZNF396Q96N95 335 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 EIF2AK1Q9BQI3 630 aaKnown RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 HTATIP2Q9BUP3 242 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 RGL1Q9NZL6 768 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 PCDH10Q9P2E7 1040 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 WRAP73Q9P2S5 460 aaPredicted RBP14.84□□□□□ -0.03
GTF3A-209ENST00000640289 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
GTF3A-209ENST00000640289 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 PP2D1A8MPX8 630 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 B4GALT4O60513 344 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 BMP15O95972 392 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 NUCB2P80303 420 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 ZNF200P98182 395 aaPredicted RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 TLE2Q04725 743 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 GRIN1Q05586 938 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 CTTNQ14247 550 aaKnown RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 ARL6IP4Q66PJ3 421 aaKnown RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 GDF6Q6KF10 455 aaPredicted RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 FAM126BQ8IXS8 530 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 CKAP2LQ8IYA6 745 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 IGSF22Q8N9C0 903 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 TRPV6Q9H1D0 765 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 TRMT13Q9NUP7 481 aaKnown RBP14.83□□□□□ -0.04
GTF3A-209ENST00000640289 SETD4Q9NVD3 440 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 GTF2IRD1Q9UHL9 959 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 TRPC6Q9Y210 931 aa14.83□□□□□ -0.04
GTF3A-209ENST00000640289 SCN10AQ9Y5Y9 1956 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 POTEB3A0JP26 581 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 SLITRK3O94933 977 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 P4HBP07237 508 aaKnown RBP14.82□□□□□ -0.04
GTF3A-209ENST00000640289 INSRRP14616 1297 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 CDC25AP30304 524 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 SLC26A2P50443 739 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 PSMC5P62195 406 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 IGBP1P78318 339 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 PRKCEQ02156 737 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 PTPN11Q06124 597 aaPredicted RBP14.82□□□□□ -0.04
GTF3A-209ENST00000640289 PPFIA1Q13136 1202 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 POTEBQ6S5H4 581 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 ANKRD33Q7Z3H0 272 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 SESTD1Q86VW0 696 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 C7orf61Q8IZ16 206 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 ATP8B4Q8TF62 1192 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 TRAPPC12Q8WVT3 735 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 DPF3Q92784 378 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 ATP6V0A1Q93050 837 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 ZBTB10Q96DT7 871 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 IPO9Q96P70 1041 aaKnown RBP14.82□□□□□ -0.04
GTF3A-209ENST00000640289 HSD17B14Q9BPX1 270 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 LXNQ9BS40 222 aa14.82□□□□□ -0.04
GTF3A-209ENST00000640289 C17orf102A2RUQ5 167 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 TMEM150BA6NC51 233 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 DCDC2CA8MYV0 355 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 MED24O75448 989 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 STBD1O95210 358 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 CD4P01730 458 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 OATP04181 439 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 SPATA31C1P0DKV0 1188 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 HOXC8P31273 242 aa14.81□□□□□ -0.04
GTF3A-209ENST00000640289 QARSP47897 775 aaKnown RBP14.81□□□□□ -0.04
GTF3A-209ENST00000640289 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms