RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 BTG3Q14201 252 aaPredicted RBP16.76■□□□□ 0.27
TARDBP-231ENST00000639599 LEXMQ3ZCV2 418 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 TMEM31Q5JXX7 168 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
TARDBP-231ENST00000639599 ANO3Q9BYT9 981 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 KCNH7Q9NS40 1196 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
TARDBP-231ENST00000639599 PRRC2BQ5JSZ5 2229 aaKnown RBP16.76■□□□□ 0.27
TARDBP-231ENST00000639599 CNTNAP5Q8WYK1 1306 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 CSPG5O95196 566 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
TARDBP-231ENST00000639599 INSRRP14616 1297 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 IBSPP21815 317 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-231ENST00000639599 STAT5BP51692 787 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 PAK2Q13177 524 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 AP3B2Q13367 1082 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 LPIN1Q14693 890 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 CEP55Q53EZ4 464 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 FAM160B1Q5W0V3 765 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-231ENST00000639599 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
TARDBP-231ENST00000639599 PPP2R3CQ969Q6 453 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 FAM122AQ96E09 287 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 LRFN2Q9ULH4 789 aa16.75■□□□□ 0.27
TARDBP-231ENST00000639599 V9GY48 417 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-231ENST00000639599 MYH7BA7E2Y1 1941 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 KLF18A0A0U1RQI7 1052 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 MBLAC1A4D2B0 266 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-231ENST00000639599 DDX39AO00148 427 aaKnown RBP16.74■□□□□ 0.27
TARDBP-231ENST00000639599 NCK2O43639 380 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 RB1P06400 928 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 ACTR2P61160 394 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
TARDBP-231ENST00000639599 MGAT3Q09327 533 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 TCEAL5Q5H9L2 206 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 FBXO47Q5MNV8 452 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-231ENST00000639599 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 OSBPL7Q9BZF2 842 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 CLDND1Q9NY35 253 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 TTC28Q96AY4 2481 aa16.74■□□□□ 0.27
TARDBP-231ENST00000639599 NFASCO94856 1347 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 BAZ2BQ9UIF8 2168 aaKnown RBP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 H3BQ06 376 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 CDC45O75419 566 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 CD52P31358 61 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 BMPR1AP36894 532 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 SLC26A2P50443 739 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 TMEM62Q0P6H9 643 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 PLPPR4Q7Z2D5 763 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 CKAP2LQ8IYA6 745 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 GJD3Q8N144 294 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 PABPC5Q96DU9 382 aaKnown RBP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
TARDBP-231ENST00000639599 GINS2Q9Y248 185 aa16.73■□□□□ 0.27
TARDBP-231ENST00000639599 RBAK-RBAKDNI3L0D1 243 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 ENPP3O14638 875 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 PLCB4Q15147 1175 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 MIS18BP1Q6P0N0 1132 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 NPAS4Q8IUM7 802 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 EPHX3Q9H6B9 360 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 AGO4Q9HCK5 861 aaKnown RBP16.72■□□□□ 0.27
TARDBP-231ENST00000639599 BARHL2Q9NY43 387 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 PCDHA2Q9Y5H9 948 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 SQORQ9Y6N5 450 aa16.72■□□□□ 0.27
TARDBP-231ENST00000639599 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
TARDBP-231ENST00000639599 STXBP3O00186 592 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 ARP10275 920 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 IL9P15248 144 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 SREBF1P36956 1147 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 KRT76Q01546 638 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
TARDBP-231ENST00000639599 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 MARCH8Q5T0T0 291 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 SPOUT1Q5T280 376 aaKnown RBP16.71■□□□□ 0.27
TARDBP-231ENST00000639599 JAKMIP3Q5VZ66 844 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 MCTP2Q6DN12 878 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 PDXDC2PQ6P474 469 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 PLA2G4DQ86XP0 818 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 NME8Q8N427 588 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
TARDBP-231ENST00000639599 PLVAPQ9BX97 442 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 C6orf50Q9HD87 102 aa16.71■□□□□ 0.27
TARDBP-231ENST00000639599 CHD9Q3L8U1 2897 aa16.7■□□□□ 0.26
TARDBP-231ENST00000639599 SMIM35A0A1B0GVV1 85 aa16.7■□□□□ 0.26
TARDBP-231ENST00000639599 C5orf67F2Z3F1 127 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms