RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 KCNH7Q9NS40 1196 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RGL1Q9NZL6 768 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 FAM184BQ9ULE4 1060 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 TRAF3IP3Q9Y228 551 aa16.06■□□□□ 0.16
CHD1L-211ENST00000639534 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 NPHP3-ACAD11A0A0J9YXS1 232 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 CHMP2AO43633 222 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 LYPLA2O95372 231 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 TRIM21P19474 475 aaKnown RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 JAK3P52333 1124 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 ZBED6P86452 979 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 KRT76Q01546 638 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 SYCP1Q15431 976 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 SNRNP48Q6IEG0 339 aaKnown RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 SFR1Q86XK3 245 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 GPRASP2Q96D09 838 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 TAAR1Q96RJ0 339 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 KCTD10Q9H3F6 313 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
CHD1L-211ENST00000639534 CSADQ9Y600 493 aa16.05■□□□□ 0.16
CHD1L-211ENST00000639534 SBF1O95248 1867 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 TTC26A0AVF1 554 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 DKC1O60832 514 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD1L-211ENST00000639534 NF2P35240 595 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
CHD1L-211ENST00000639534 CDK17Q00537 523 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 NFIL3Q16649 462 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 KNOP1Q1ED39 458 aaKnown RBP16.04■□□□□ 0.16
CHD1L-211ENST00000639534 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 C1orf186Q6ZWK4 172 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
CHD1L-211ENST00000639534 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 RUSC1Q9BVN2 902 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 ACAD9Q9H845 621 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
CHD1L-211ENST00000639534 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
CHD1L-211ENST00000639534 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 DDNO94850 711 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 ZNF131P52739 623 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 MRPS9P82933 396 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 DGKZQ13574 1117 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 ALCAMQ13740 583 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 MEA1Q16626 185 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 PRAMEF18Q5VWM3 479 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 TOGARAM2Q6ZUX3 1019 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 LXNQ9BS40 222 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 NUCKS1Q9H1E3 243 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 METTL14Q9HCE5 456 aaKnown RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 ZNF214Q9UL59 606 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-211ENST00000639534 SNCAIPQ9Y6H5 919 aa16.03■□□□□ 0.16
CHD1L-211ENST00000639534 SOWAHDA6NJG2 315 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 DHX15O43143 795 aaKnown RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 MAPTP10636 758 aaKnown RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 CYLC1P35663 651 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 QARSP47897 775 aaKnown RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 RAD51AP2Q09MP3 1159 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 ADAM9Q13443 819 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 RAD9BQ6WBX8 426 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 SYT10Q6XYQ8 523 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.16
CHD1L-211ENST00000639534 FRMD5Q7Z6J6 570 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 GLIS3Q8NEA6 775 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 GOLGA5Q8TBA6 731 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 SENP7Q9BQF6 1050 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
CHD1L-211ENST00000639534 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 WDR64B1ANS9 1081 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 CTIFO43310 598 aaKnown RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 GCNT3O95395 438 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 MYCLP12524 364 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 KRT83P78385 493 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
CHD1L-211ENST00000639534 VGLL4Q14135 290 aa16.01■□□□□ 0.15
CHD1L-211ENST00000639534 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms