RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
PTPRVP-204ENST00000639439 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
PTPRVP-204ENST00000639439 TSPYL2Q9H2G4 693 aaPredicted RBP17.71■□□□□ 0.43
PTPRVP-204ENST00000639439 CERS4Q9HA82 394 aa17.71■□□□□ 0.43
PTPRVP-204ENST00000639439 SLC26A2P50443 739 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 STAT5BP51692 787 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 MYOCDQ8IZQ8 938 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 CRYGNQ8WXF5 182 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 PHKBQ93100 1093 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 PCYT2Q99447 389 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 SLC26A6Q9BXS9 759 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 THEGQ9P2T0 379 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
PTPRVP-204ENST00000639439 TTC28Q96AY4 2481 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 ARHGEF15O94989 841 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 ATG7O95352 703 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 INSRRP14616 1297 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 SETQ01105 290 aaPredicted RBP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 CCDC85BQ15834 202 aaPredicted RBP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 TJAP1Q5JTD0 557 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 RUFY4Q6ZNE9 571 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 ATXN2LQ8WWM7 1075 aaKnown RBP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 ZNF274Q96GC6 653 aaPredicted RBP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 IFIH1Q9BYX4 1025 aaKnown RBP17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 TRPC6Q9Y210 931 aa17.69■□□□□ 0.42
PTPRVP-204ENST00000639439 LCHNA4D1U4 455 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 IGBP1P78318 339 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 MARCH8Q5T0T0 291 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 FAM160B1Q5W0V3 765 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 FAM117BQ6P1L5 589 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 TBC1D22BQ9NU19 505 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 MTCH2Q9Y6C9 303 aa17.68■□□□□ 0.42
PTPRVP-204ENST00000639439 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 LINC01553A4QN01 128 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 EPOPA6NHQ4 379 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 RFXAPO00287 272 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 CPLX1O14810 134 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 CHRNA1P02708 482 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 ERVK-21P61565 698 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 HTRA4P83105 476 aaPredicted RBP17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 MGAT3Q09327 533 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 PLCB4Q15147 1175 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 ABHD15Q6UXT9 468 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 DNAJB3Q8WWF6 145 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 ZNF577Q9BSK1 485 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 PRDM6Q9NQX0 595 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 TCEAL9Q9UHQ7 104 aa17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 PRRC2BQ5JSZ5 2229 aaKnown RBP17.67■□□□□ 0.42
PTPRVP-204ENST00000639439 PTPRSQ13332 1948 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 TRANK1O15050 2925 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 POTEB3A0JP26 581 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 BACH1O14867 736 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 CCNE2O96020 404 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 GHRP10912 638 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 CIITAP33076 1130 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 SSRP1Q08945 709 aaKnown RBP17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 GRB10Q13322 594 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 IER5Q5VY09 327 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 MIS18BP1Q6P0N0 1132 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 POTEBQ6S5H4 581 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 FAM177A1Q8N128 213 aaPredicted RBP17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 OSBPL7Q9BZF2 842 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 LMCD1Q9NZU5 365 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 SQORQ9Y6N5 450 aa17.66■□□□□ 0.42
PTPRVP-204ENST00000639439 VCANP13611 3396 aa17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 M0QZ92 97 aa17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 DDX39AO00148 427 aaKnown RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 DHX15O43143 795 aaKnown RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 HBP1O60381 514 aa17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 NLRP5P59047 1200 aa17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 MRPS5P82675 430 aaKnown RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 MRPS6P82932 125 aaKnown RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 LPIN1Q14693 890 aa17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 ZNF746Q6NUN9 644 aaPredicted RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 SMAP1Q8IYB5 467 aaPredicted RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 SP7Q8TDD2 431 aaPredicted RBP17.65■□□□□ 0.42
PTPRVP-204ENST00000639439 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms