RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 LRRC45Q96CN5 670 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 GPCPD1Q9NPB8 672 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 AIPL1Q9NZN9 384 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 ATP8A1Q9Y2Q0 1164 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 SMIM23A6NLE4 172 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 SCFD1Q8WVM8 642 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 LZTS2Q9BRK4 669 aa22.08■■□□□ 1.13
CACNA1A-243ENST00000637616 CUL1Q13616 776 aa22.08■■□□□ 1.12
CACNA1A-243ENST00000637616 ALKBH5Q6P6C2 394 aaKnown RBP22.08■■□□□ 1.12
CACNA1A-243ENST00000637616 LRIG3Q6UXM1 1119 aa22.08■■□□□ 1.12
CACNA1A-243ENST00000637616 PARP9Q8IXQ6 854 aa22.08■■□□□ 1.12
CACNA1A-243ENST00000637616 KIAA1551Q9HCM1 1747 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 PGRMC1O00264 195 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 CASP5P51878 434 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 PSMD2Q13200 908 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 PEX26Q7Z412 305 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 LRRC47Q8N1G4 583 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 HAS1Q92839 578 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 NAGPAQ9UK23 515 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 AJAP1Q9UKB5 411 aaPredicted RBP22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 ZNF652Q9Y2D9 606 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 SCTRP47872 440 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 TMEM119Q4V9L6 283 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 TBC1D9BQ66K14 1250 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 CACNA2D3Q8IZS8 1091 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 KIRREL3Q8IZU9 778 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 LRRC57Q8N9N7 239 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 RBM46Q8TBY0 533 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 RAB34Q9BZG1 259 aa22.07■■□□□ 1.12
CACNA1A-243ENST00000637616 ADCY7P51828 1080 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 DCAF17Q5H9S7 520 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 N4BP2L2Q92802 583 aaPredicted RBP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 FAM212AQ96EL1 285 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 EMILIN3Q9NT22 766 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 TPX2Q9ULW0 747 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 IFFO1Q0D2I5 559 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 PRPF4BQ13523 1007 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 SNCBQ16143 134 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 RUFY4Q6ZNE9 571 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 DAAM2Q86T65 1068 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 C1orf131Q8NDD1 294 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 PNMA2Q9UL42 364 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 SUFUQ9UMX1 484 aa22.06■■□□□ 1.12
CACNA1A-243ENST00000637616 POTEB3A0JP26 581 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 FRMD3A2A2Y4 597 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 POTECB2RU33 542 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 SCP2P22307 547 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 NR2F2P24468 414 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 POTEBQ6S5H4 581 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 TMC3Q7Z5M5 1100 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 TPCN2Q8NHX9 752 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 BCAS3Q9H6U6 928 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 DDX25Q9UHL0 483 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 TLDC2A0PJX2 215 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 UCHL3P15374 230 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 TCERG1LQ5VWI1 586 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 GPBP1Q86WP2 473 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 ACTRT1Q8TDG2 376 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 GOPCQ9HD26 462 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 ODF2LQ9ULJ1 636 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 KRT18P05783 430 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 STAT3P40763 770 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 PDIA5Q14554 519 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 UHMK1Q8TAS1 419 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 PBKQ96KB5 322 aa22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 BMP2KQ9NSY1 1161 aaPredicted RBP22.05■■□□□ 1.12
CACNA1A-243ENST00000637616 RREB1Q92766 1687 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 CAND2O75155 1236 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 SHBGP04278 402 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 PREPLQ4J6C6 727 aaPredicted RBP22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 EP400NLQ6ZTU2 488 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 KCTD10Q9H3F6 313 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 OSGEPQ9NPF4 335 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 A1CFQ9NQ94 594 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 MCM8Q9UJA3 840 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 PCDHA12Q9UN75 941 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 MYH14Q7Z406 1995 aaKnown RBP22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 BIRC3Q13489 604 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 NEDD9Q14511 834 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 ANKIB1Q9P2G1 1089 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 PCDHA2Q9Y5H9 948 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 LAMB1P07942 1786 aa22.04■■□□□ 1.12
CACNA1A-243ENST00000637616 KCNQ2O43526 872 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 GKAP1Q5VSY0 366 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 TBC1D31Q96DN5 1066 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 SCN7AQ01118 1682 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 F8W031 263 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 BAG3O95817 575 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 FGGP02679 453 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 PLA2G4BP0C869 781 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 NF2P35240 595 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 PLCB4Q15147 1175 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 SPTY2D1Q68D10 685 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 U2AF1L4Q8WU68 220 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 TATDN2Q93075 761 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 HVCN1Q96D96 273 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 CEP63Q96MT8 703 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 GGA2Q9UJY4 613 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms