RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RRN3P2A6NIE6 340 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 IPO5O00410 1097 aaKnown RBP15.67■□□□□ 0.1
PNKP-228ENST00000637325 EFCAB14O75071 495 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 CTSHP09668 335 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 XBP1P17861 261 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 GRIN2CQ14957 1233 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 TRAF7Q6Q0C0 670 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 PLPPR4Q7Z2D5 763 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 RSPH3Q86UC2 560 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 BLIDQ8IZY5 108 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 FAM177A1Q8N128 213 aaPredicted RBP15.67■□□□□ 0.1
PNKP-228ENST00000637325 SLC17A8Q8NDX2 589 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 PCYT2Q99447 389 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 TBC1D22BQ9NU19 505 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
PNKP-228ENST00000637325 SEC24BO95487 1268 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 MYOGP15173 224 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 CIITAP33076 1130 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 USP11P51784 963 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 NEK4P51957 841 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 ADAM17P78536 824 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 MBTPS1Q14703 1052 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 TAF2Q6P1X5 1199 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 HERC6Q8IVU3 1022 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 AIFM3Q96NN9 605 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
PNKP-228ENST00000637325 ZBED2Q9BTP6 218 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
PNKP-228ENST00000637325 ATG7O95352 703 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 CCNE2O96020 404 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 INSRRP14616 1297 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
PNKP-228ENST00000637325 PLCB4Q15147 1175 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 RUFY4Q6ZNE9 571 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 DBF4BQ8NFT6 615 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 TBCKQ8TEA7 893 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 WASF1Q92558 559 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 SEPT8Q92599 483 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 ZNF302Q9NR11 478 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 SIP14410 1827 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
PNKP-228ENST00000637325 POTEB3A0JP26 581 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 DHX15O43143 795 aaKnown RBP15.64■□□□□ 0.09
PNKP-228ENST00000637325 TLL1O43897 1013 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 SLC26A2P50443 739 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 KRT76Q01546 638 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
PNKP-228ENST00000637325 SWSAP1Q6NVH7 229 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 PDXDC2PQ6P474 469 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 POTEBQ6S5H4 581 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 CKAP2LQ8IYA6 745 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 NECAB1Q8N987 351 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 DAGLBQ8NCG7 672 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 MAFAQ8NHW3 353 aaPredicted RBP15.64■□□□□ 0.09
PNKP-228ENST00000637325 IL17RAQ96F46 866 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 PRDM12Q9H4Q4 367 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
PNKP-228ENST00000637325 KCNJ14Q9UNX9 436 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 SAMM50Q9Y512 469 aa15.64■□□□□ 0.09
PNKP-228ENST00000637325 CDH23Q9H251 3354 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 CCDC194A0A1B0GVG4 234 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 MBLAC1A4D2B0 266 aaPredicted RBP15.63■□□□□ 0.09
PNKP-228ENST00000637325 HBP1O60381 514 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 AMHP03971 560 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
PNKP-228ENST00000637325 CA3P07451 260 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 PSAPP07602 524 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 DEFB103AP81534 67 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 NONOQ15233 471 aaKnown RBP eCLIP15.63■□□□□ 0.09
PNKP-228ENST00000637325 TCTN1Q2MV58 587 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 PLEKHG4Q58EX7 1191 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 FAM26DQ5JW98 314 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 MARCH8Q5T0T0 291 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 KRT25Q7Z3Z0 450 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 SMAP1Q8IYB5 467 aaPredicted RBP15.63■□□□□ 0.09
PNKP-228ENST00000637325 DNAJB3Q8WWF6 145 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 FAM49AQ9H0Q0 323 aaPredicted RBP15.63■□□□□ 0.09
PNKP-228ENST00000637325 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
PNKP-228ENST00000637325 IGKV6D-21A0A0A0MT36 114 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 M0QZ92 97 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 MSH4O15457 936 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 GAS7O60861 476 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 DTNBO60941 627 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 CHRNA1P02708 482 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 ME3Q16798 604 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 IER5Q5VY09 327 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 FAM117BQ6P1L5 589 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 TMCO2Q7Z6W1 182 aaPredicted RBP15.62■□□□□ 0.09
PNKP-228ENST00000637325 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 CCDC60Q8IWA6 550 aaPredicted RBP15.62■□□□□ 0.09
PNKP-228ENST00000637325 ATP8B4Q8TF62 1192 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 TRAPPC12Q8WVT3 735 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 GTF3C6Q969F1 213 aa15.62■□□□□ 0.09
PNKP-228ENST00000637325 LENG9Q96B70 501 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms