RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 EVCP57679 992 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 NTRK3Q16288 839 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 MYOCDQ8IZQ8 938 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 PCYT2Q99447 389 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 VPS54Q9P1Q0 977 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.32
CACNA1A-230ENST00000636768 RRN3P2A6NIE6 340 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 FAM86B1E9PN63 330 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 BACH1O14867 736 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 ADAMTS3O15072 1205 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 CYP3A4P08684 503 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 FAM86B2P0C5J1 330 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 INSRRP14616 1297 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 STAT5BP51692 787 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 TET1Q8NFU7 2136 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 COL25A1Q9BXS0 654 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 IFIH1Q9BYX4 1025 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 PRDM6Q9NQX0 595 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 TCEAL9Q9UHQ7 104 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 TRIP12Q14669 1992 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 DOCK5Q9H7D0 1870 aa17.07■□□□□ 0.32
CACNA1A-230ENST00000636768 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 EPOPA6NHQ4 379 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 GHRP10912 638 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 PLCB4Q15147 1175 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 MARCH8Q5T0T0 291 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 FAM160B1Q5W0V3 765 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 PLPPR4Q7Z2D5 763 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 RPAINQ86UA6 219 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 CRYGNQ8WXF5 182 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 APBB2Q92870 758 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 LARP6Q9BRS8 491 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 ZNF577Q9BSK1 485 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 FAM49AQ9H0Q0 323 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 PDRG1Q9NUG6 133 aa17.06■□□□□ 0.32
CACNA1A-230ENST00000636768 GBF1Q92538 1859 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 IGLV3-22A0A075B6J6 115 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 CCNE2O96020 404 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 CHRNA1P02708 482 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 SLC26A2P50443 739 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 NLRP5P59047 1200 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 STK3Q13188 491 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 PRR16Q569H4 304 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 SPRED2Q7Z698 418 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 ZNF274Q96GC6 653 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 THEGQ9P2T0 379 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 INSL6Q9Y581 213 aa17.05■□□□□ 0.32
CACNA1A-230ENST00000636768 POTEB3A0JP26 581 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 ATG7O95352 703 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 RPLP2P05387 115 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 SKIV2LQ15477 1246 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 MIS18BP1Q6P0N0 1132 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 POTEBQ6S5H4 581 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 TRAPPC12Q8WVT3 735 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 TGS1Q96RS0 853 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 TBC1D22BQ9NU19 505 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 CDY2AQ9Y6F7 541 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 PRUNE2Q8WUY3 3088 aa17.04■□□□□ 0.32
CACNA1A-230ENST00000636768 LINC01553A4QN01 128 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 M0QZ92 97 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 DHX15O43143 795 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 UPP2O95045 317 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 DEXIO95424 95 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 MRPS6P82932 125 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 MGAT3Q09327 533 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 GRB10Q13322 594 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 LPIN1Q14693 890 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 TJAP1Q5JTD0 557 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 ABHD15Q6UXT9 468 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 GDPD5Q8WTR4 605 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 ZNF302Q9NR11 478 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 MTCH2Q9Y6C9 303 aa17.03■□□□□ 0.32
CACNA1A-230ENST00000636768 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 POU3F3P20264 500 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 CIITAP33076 1130 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 IER5Q5VY09 327 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 KRT40Q6A162 431 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms