RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 LRIG3Q6UXM1 1119 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 NLRP14Q86W24 1093 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 ADGRF4Q8IZF3 695 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 LRRC57Q8N9N7 239 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 UIMC1Q96RL1 719 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 CD209Q9NNX6 404 aa23.63■■□□□ 1.37
CLN5-215ENST00000636767 UAP1Q16222 522 aaPredicted RBP23.62■■□□□ 1.37
CLN5-215ENST00000636767 EDRF1Q3B7T1 1238 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 C10orf76Q5T2E6 689 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 CUL5Q93034 780 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 PBKQ96KB5 322 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 CCT8L2Q96SF2 557 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 BHMG1C9JSJ3 638 aaPredicted RBP23.62■■□□□ 1.37
CLN5-215ENST00000636767 GNPATO15228 680 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 ZBTB48P10074 688 aaPredicted RBP23.62■■□□□ 1.37
CLN5-215ENST00000636767 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
CLN5-215ENST00000636767 HDLBPQ00341 1268 aaKnown RBP23.62■■□□□ 1.37
CLN5-215ENST00000636767 CUL1Q13616 776 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 DNAAF5Q86Y56 855 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 ACTRT1Q8TDG2 376 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 YY1AP1Q9H869 796 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 HDAC9Q9UKV0 1011 aa23.62■■□□□ 1.37
CLN5-215ENST00000636767 FOCADQ5VW36 1801 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 H0YGN5 161 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 CETN3O15182 167 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 CEP104O60308 925 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 AKR1B1P15121 316 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 SLC9A1P19634 815 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 NR2F2P24468 414 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 ZNF543Q08ER8 600 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 PPP4R3CPQ6ZMV5 832 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 MICALCLQ6ZW33 695 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 YTHDF3Q7Z739 585 aaKnown RBP23.61■■□□□ 1.37
CLN5-215ENST00000636767 NFS1Q9Y697 457 aa23.61■■□□□ 1.37
CLN5-215ENST00000636767 IGKV6D-41A0A0C4DH26 115 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 FRMD3A2A2Y4 597 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 HPDP32754 393 aaPredicted RBP23.6■■□□□ 1.37
CLN5-215ENST00000636767 PTPROQ16827 1216 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 SWT1Q5T5J6 900 aaKnown RBP23.6■■□□□ 1.37
CLN5-215ENST00000636767 BARGINQ6ZT62 677 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 AMIGO3Q86WK7 504 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 DDX42Q86XP3 938 aaKnown RBP eCLIP23.6■■□□□ 1.37
CLN5-215ENST00000636767 CEP89Q96ST8 783 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 LTBP4Q8N2S1 1624 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 AHDC1Q5TGY3 1603 aaPredicted RBP23.6■■□□□ 1.37
CLN5-215ENST00000636767 GOLGA6L10A6NI86 522 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 UCHL3P15374 230 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 CASP5P51878 434 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 RC3H1Q5TC82 1133 aaKnown RBP23.6■■□□□ 1.37
CLN5-215ENST00000636767 TTBK2Q6IQ55 1244 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 OR2W6PQ8NHA6 318 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 NEUROG2Q9H2A3 272 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 NAGPAQ9UK23 515 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 GAKO14976 1311 aa23.6■■□□□ 1.37
CLN5-215ENST00000636767 SRRM3A6NNA2 597 aaPredicted RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 MYO1FO00160 1098 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 FAM107AO95990 144 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 GPSM2P81274 684 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 ARSHQ5FYA8 562 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 DPP8Q6V1X1 898 aaPredicted RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 PTF1AQ7RTS3 328 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 CALR3Q96L12 384 aaKnown RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 SPAG5Q96R06 1193 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 AP1M1Q9BXS5 423 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 GCOM1H8Y6P7 765 aaPredicted RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 MYZAPP0CAP1 466 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 IFI16Q16666 785 aaKnown RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 FAM163AQ96GL9 167 aaPredicted RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 CENPHQ9H3R5 247 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 ZHX3Q9H4I2 956 aa23.59■■□□□ 1.37
CLN5-215ENST00000636767 NOC2LQ9Y3T9 749 aaKnown RBP23.59■■□□□ 1.37
CLN5-215ENST00000636767 E7EVH7 732 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 PGRMC1O00264 195 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 MRPL12P52815 198 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 SLC12A3P55017 1021 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 GABPAQ06546 454 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 ZNF844Q08AG5 666 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 METTL13Q8N6R0 699 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 PROCA1Q8NCQ7 364 aaPredicted RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 TPCN2Q8NHX9 752 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 RBM46Q8TBY0 533 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 BZW2Q9Y6E2 419 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 SART1O43290 800 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 MED24O75448 989 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 MFSD14BQ5SR56 506 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 ALKBH5Q6P6C2 394 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 LRRC45Q96CN5 670 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.58■■□□□ 1.37
CLN5-215ENST00000636767 DDX47Q9H0S4 455 aaKnown RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 NENFQ9UMX5 172 aa23.58■■□□□ 1.37
CLN5-215ENST00000636767 ATF5Q9Y2D1 282 aaPredicted RBP23.58■■□□□ 1.37
CLN5-215ENST00000636767 UFL1O94874 794 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 KRT18P05783 430 aaKnown RBP23.57■■□□□ 1.36
CLN5-215ENST00000636767 IL1R1P14778 569 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 PON1P27169 355 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 ARFGAP2Q8N6H7 521 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 PSTPIP2Q9H939 334 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 PITPNM2Q9BZ72 1349 aa23.57■■□□□ 1.36
CLN5-215ENST00000636767 AFPP02771 609 aaKnown RBP23.57■■□□□ 1.36
CLN5-215ENST00000636767 CTNNA1P35221 906 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms