RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 ATRNO75882 1429 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 MPHOSPH10O00566 681 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 TRAPPC3O43617 180 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 CYP2D6P10635 497 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 HSPA6P17066 643 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 PMS2P54278 862 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 GRM4Q14833 912 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 ZSCAN29Q8IWY8 852 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 KDM4CQ9H3R0 1056 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 SEMA6BQ9H3T3 888 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 PNMA2Q9UL42 364 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 SNX24Q9Y343 169 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 BAZ2BQ9UIF8 2168 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 A0A087X0T9 212 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 MYMKA6NI61 221 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 TTI1O43156 1089 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 FAM13AO94988 1023 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 FAM228BP0C875 321 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 SSR1P43307 286 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 TAF11Q15544 211 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 MEI1Q5TIA1 1274 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 CAPRIN2Q6IMN6 1127 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 RAD54LQ92698 747 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 EYA3Q99504 573 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 DNM3Q9UQ16 869 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 MED1Q15648 1581 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 ZNF263O14978 683 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 KLRC4O43908 158 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 USP17L8P0C7I0 530 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 GHRP10912 638 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 CHN1P15882 459 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 FGFR2P21802 821 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 RASSF2P50749 326 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 NUGGCQ68CJ6 796 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 PPP4R3CPQ6ZMV5 832 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 C1orf131Q8NDD1 294 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 VCXQ9H320 206 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 DIS3Q9Y2L1 958 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 LEMD3Q9Y2U8 911 aa9.12□□□□□ -0.95
SMARCA2-246ENST00000635739 LRRD1A4D1F6 860 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 CCDC38Q502W7 563 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 SUSD4Q5VX71 490 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 TRPM8Q7Z2W7 1104 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 TGFBRAP1Q8WUH2 860 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 NSMCE1Q8WV22 266 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PIGBQ92521 554 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 CARD10Q9BWT7 1032 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 DDX25Q9UHL0 483 aaKnown RBP9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 TCEAL9Q9UHQ7 104 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 USP17L3A6NCW0 530 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 USP17L4A6NCW7 530 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 POTEMA6NI47 508 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PLCG2P16885 1265 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 ERVK-9P63128 1117 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MECOMQ03112 1051 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 ZNF844Q08AG5 666 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 COASYQ13057 564 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 USP17L1Q7RTZ2 530 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PROCA1Q8NCQ7 364 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PPFIBP2Q8ND30 876 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MDM1Q8TC05 714 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 TTYH3Q9C0H2 523 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 AZI2Q9H6S1 392 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 SIK3Q9Y2K2 1263 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MEGF6O75095 1541 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PASKQ96RG2 1323 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MXRA7P84157 204 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 IL17AQ16552 155 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MIIPQ5JXC2 388 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 MAPKAPK5Q8IW41 473 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 VGLL2Q8N8G2 317 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 WDR66Q8TBY9 1149 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 KANSL2Q9H9L4 492 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 ARHGAP23Q9P227 1491 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 NID2Q14112 1375 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 FAM205AQ6ZU69 1335 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 GFPT2O94808 682 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 GCNT3O95395 438 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 GSTA1P08263 222 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 ZNF572Q7Z3I7 529 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 TNFRSF25Q93038 417 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 DYNLL2Q96FJ2 89 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 PIGSQ96S52 555 aa9.11□□□□□ -0.95
SMARCA2-246ENST00000635739 SLIT3O75094 1523 aa9.1□□□□□ -0.95
SMARCA2-246ENST00000635739 TOPAZ1Q8N9V7 1692 aa9.1□□□□□ -0.95
SMARCA2-246ENST00000635739 KDM3BQ7LBC6 1761 aa9.1□□□□□ -0.95
SMARCA2-246ENST00000635739 PODXLO00592 558 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms