RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 GJB5O95377 273 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 AMHP03971 560 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 INSRRP14616 1297 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 DEFB103AP81534 67 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 TAP1Q03518 808 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
SSBP4-215ENST00000625926 FAM26DQ5JW98 314 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
SSBP4-215ENST00000625926 TMCO2Q7Z6W1 182 aaPredicted RBP12.33□□□□□ -0.44
SSBP4-215ENST00000625926 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 RAD9AQ99638 391 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 TUBE1Q9UJT0 475 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 MBLAC1A4D2B0 266 aaPredicted RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 IPO5O00410 1097 aaKnown RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 DHX15O43143 795 aaKnown RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 CIITAP33076 1130 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 SLC26A2P50443 739 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 NLRP5P59047 1200 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 IGBP1P78318 339 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 PLCB4Q15147 1175 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 USP38Q8NB14 1042 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 APBB2Q92870 758 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
SSBP4-215ENST00000625926 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 CERS4Q9HA82 394 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 TBC1D22BQ9NU19 505 aa12.32□□□□□ -0.44
SSBP4-215ENST00000625926 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 BACH1O14867 736 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
SSBP4-215ENST00000625926 DEXIO95424 95 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 CCNE2O96020 404 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 CHRNA1P02708 482 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 USP11P51784 963 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 ANAPC15P60006 121 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 STK3Q13188 491 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
SSBP4-215ENST00000625926 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
SSBP4-215ENST00000625926 PRR16Q569H4 304 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 MIS18BP1Q6P0N0 1132 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 FAM117BQ6P1L5 589 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 RASGRP4Q8TDF6 673 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 DNAJB3Q8WWF6 145 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 FAM122AQ96E09 287 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 IFIH1Q9BYX4 1025 aaKnown RBP12.31□□□□□ -0.44
SSBP4-215ENST00000625926 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
SSBP4-215ENST00000625926 LCHNA4D1U4 455 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 RFXAPO00287 272 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
SSBP4-215ENST00000625926 ARHGEF15O94989 841 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 POU3F3P20264 500 aaPredicted RBP12.3□□□□□ -0.44
SSBP4-215ENST00000625926 IER5Q5VY09 327 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 SWSAP1Q6NVH7 229 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 TOP1MTQ969P6 601 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 FAM49AQ9H0Q0 323 aaPredicted RBP12.3□□□□□ -0.44
SSBP4-215ENST00000625926 ZNF302Q9NR11 478 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 TCEAL9Q9UHQ7 104 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 PCDHA4Q9UN74 947 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
SSBP4-215ENST00000625926 EPOPA6NHQ4 379 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 HBP1O60381 514 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 CDKL5O76039 1030 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 GHRP10912 638 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 MRPS6P82932 125 aaKnown RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 KRT76Q01546 638 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 MGAT3Q09327 533 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 CCDC60Q8IWA6 550 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 NME8Q8N427 588 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 TRAPPC12Q8WVT3 735 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 ZBTB10Q96DT7 871 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
SSBP4-215ENST00000625926 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-215ENST00000625926 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms