RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 MACROD2A1Z1Q3 448 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 KRT86O43790 486 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 CYP11B2P19099 503 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 GNA11P29992 359 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 GJA8P48165 433 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 NT5C2P49902 561 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 SPATA7Q9P0W8 599 aa13.62□□□□□ -0.23
LITAF-221ENST00000622633 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
LITAF-221ENST00000622633 A6NNZ2 444 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZNF185O15231 689 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 MAP3K13O43283 966 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZNF189O75820 626 aaPredicted RBP13.61□□□□□ -0.23
LITAF-221ENST00000622633 PLEKP08567 350 aaPredicted RBP13.61□□□□□ -0.23
LITAF-221ENST00000622633 ABL2P42684 1182 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 AMPD3Q01432 767 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 GRAPQ13588 217 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZNF804AQ7Z570 1209 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 FAM114A1Q8IWE2 563 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 NEDD1Q8NHV4 660 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
LITAF-221ENST00000622633 CEP95Q96GE4 821 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 PCMTD2Q9NV79 361 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZFATQ9P243 1243 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
LITAF-221ENST00000622633 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZMYND10O75800 440 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 SLC5A4Q9NY91 659 aa13.61□□□□□ -0.23
LITAF-221ENST00000622633 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
LITAF-221ENST00000622633 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 CNNM4Q6P4Q7 775 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 ZNF662Q6ZS27 426 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
LITAF-221ENST00000622633 EHBP1Q8NDI1 1231 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 MIPOL1Q8TD10 442 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 SLC35B4Q969S0 331 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 EPN3Q9H201 632 aa13.6□□□□□ -0.23
LITAF-221ENST00000622633 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
LITAF-221ENST00000622633 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
LITAF-221ENST00000622633 MYMKA6NI61 221 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 PDE2AO00408 941 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 ZNF263O14978 683 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 RPL13P26373 211 aaKnown RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 ELF3P78545 371 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 GRB10Q13322 594 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 CRELD2Q6UXH1 353 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 SV2BQ7L1I2 683 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 REXO1Q8N1G1 1221 aaKnown RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 SMCR8Q8TEV9 937 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 ERGIC2Q96RQ1 377 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 PHF24Q9UPV7 400 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 TMEM98Q9Y2Y6 226 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 L3MBTL1Q9Y468 752 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 GOLGA6L10A6NI86 522 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 EPHB6O15197 1021 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 GPSM2P81274 684 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 KIF5AQ12840 1032 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 CALCRLQ16602 461 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 Q4G0T1 1027 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 CCDC121Q6ZUS5 278 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 COA7Q96BR5 231 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 CCDC42Q96M95 316 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 PNMA5Q96PV4 448 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 BLOC1S4Q9NUP1 217 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
LITAF-221ENST00000622633 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
LITAF-221ENST00000622633 IDEP14735 1019 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 LSP1P33241 339 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 VWA3BQ502W6 1294 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 ANKRD20A8PQ5CZ79 823 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 CENPPQ6IPU0 288 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 C2CD5Q86YS7 1000 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 DTNBP1Q96EV8 351 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 HINFPQ9BQA5 517 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 UNC45AQ9H3U1 944 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 CD209Q9NNX6 404 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 JADE2Q9NQC1 790 aa13.58□□□□□ -0.23
LITAF-221ENST00000622633 WDR35Q9P2L0 1181 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms