RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 KRIT1O00522 736 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 TRPM8Q7Z2W7 1104 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 KRT16P08779 473 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 KLRK1P26718 216 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 MKRN4PQ13434 485 aaPredicted RBP23.71■■□□□ 1.39
PCSK6-220ENST00000622483 MEI1Q5TIA1 1274 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 ADGRA1Q86SQ6 560 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 FAM114A1Q8IWE2 563 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 UIMC1Q96RL1 719 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 SAMD15Q9P1V8 674 aa23.71■■□□□ 1.39
PCSK6-220ENST00000622483 A0A1W2PQJ5 194 aa23.7■■□□□ 1.39
PCSK6-220ENST00000622483 BICDL2A1A5D9 508 aa23.7■■□□□ 1.39
PCSK6-220ENST00000622483 LONP1P36776 959 aaKnown RBP23.7■■□□□ 1.39
PCSK6-220ENST00000622483 RNASELQ05823 741 aaKnown RBP23.7■■□□□ 1.39
PCSK6-220ENST00000622483 PRPF4BQ13523 1007 aaKnown RBP23.7■■□□□ 1.39
PCSK6-220ENST00000622483 L3MBTL3Q96JM7 780 aaPredicted RBP23.7■■□□□ 1.39
PCSK6-220ENST00000622483 ECT2Q9H8V3 914 aa23.7■■□□□ 1.39
PCSK6-220ENST00000622483 GYG1P46976 350 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 ERMARDQ5T6L9 678 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 PDXDC1Q6P996 788 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 LRIG3Q6UXM1 1119 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 TRIM9Q9C026 710 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 PIDD1Q9HB75 910 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 RBM28Q9NW13 759 aaKnown RBP23.7■■□□□ 1.38
PCSK6-220ENST00000622483 TFCP2L1Q9NZI6 479 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 FOXO6A8MYZ6 492 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 LINGO3P0C6S8 592 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 TXNRD1Q16881 649 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 FAM129AQ9BZQ8 928 aa23.7■■□□□ 1.38
PCSK6-220ENST00000622483 TMC3Q7Z5M5 1100 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 C4orf32Q8N8J7 132 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 OSBPL1AQ9BXW6 950 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 SLC12A4Q9UP95 1085 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 PDE8BO95263 885 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 SCG2P13521 617 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 TROAPQ12815 778 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 ALX1Q15699 326 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 ASTE1Q2TB18 679 aaPredicted RBP23.69■■□□□ 1.38
PCSK6-220ENST00000622483 SLC9C1Q4G0N8 1177 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 ZSCAN29Q8IWY8 852 aaPredicted RBP23.69■■□□□ 1.38
PCSK6-220ENST00000622483 KLHL29Q96CT2 875 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 NR2E1Q9Y466 385 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 RIC1Q4ADV7 1423 aa23.69■■□□□ 1.38
PCSK6-220ENST00000622483 SNUPNO95149 360 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NFIXQ14938 502 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 ANKRD20A2Q5SQ80 823 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 ANKRD20A1Q5TYW2 823 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 ANKRD20A3Q5VUR7 823 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 OTUD6AQ7L8S5 288 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 AZI2Q9H6S1 392 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 KBTBD4Q9NVX7 518 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 TBC1D7Q9P0N9 293 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NOC2LQ9Y3T9 749 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 TAF1P21675 1872 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 TJP1Q07157 1748 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 F8VZ95 297 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NQO1P15559 274 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 IGHMBP2P38935 993 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 ADCY1Q08828 1119 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 RBBP5Q15291 538 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 TAF11Q15544 211 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 SLC5A4Q9NY91 659 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 CCDC194A0A1B0GVG4 234 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 PJA2O43164 708 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 HNRNPH3P31942 346 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 CHRNDQ07001 517 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 PSMD2Q13200 908 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 ZNF317Q96PQ6 595 aaPredicted RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 LSM14BQ9BX40 385 aaKnown RBP23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NARFQ9UHQ1 456 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NUP188Q5SRE5 1749 aa23.68■■□□□ 1.38
PCSK6-220ENST00000622483 NAB2Q15742 525 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 SFMBT2Q5VUG0 894 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 TMTC3Q6ZXV5 915 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 C3orf20Q8ND61 904 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 BATF3Q9NR55 127 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 INTS9Q9NV88 658 aaKnown RBP23.67■■□□□ 1.38
PCSK6-220ENST00000622483 TSKSQ9UJT2 592 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 CNTNAP5Q8WYK1 1306 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 LCA5LO95447 670 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 GHRP10912 638 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 CYP7A1P22680 504 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 TECP42680 631 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 TUBP50607 506 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 KCNMA1Q12791 1236 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 CABP7Q86V35 215 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 SWAP70Q9UH65 585 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 NUP98P52948 1817 aa23.67■■□□□ 1.38
PCSK6-220ENST00000622483 CTCFP49711 727 aaPredicted RBP23.66■■□□□ 1.38
PCSK6-220ENST00000622483 NCALDP61601 193 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 FAM83BQ5T0W9 1011 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 DAAM2Q86T65 1068 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 RNF10Q8N5U6 811 aaKnown RBP23.66■■□□□ 1.38
PCSK6-220ENST00000622483 SMIM24O75264 130 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.382e-8■■■□□ 16.5
PCSK6-220ENST00000622483 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 METTL13Q8N6R0 699 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 CPVLQ9H3G5 476 aa23.66■■□□□ 1.38
PCSK6-220ENST00000622483 RNF41Q9H4P4 317 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms