RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CATSPEREQ5SY80 951 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 BTBD8Q5XKL5 378 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 TP53INP2Q8IXH6 220 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 TTLL11Q8NHH1 800 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 CLEC4DQ8WXI8 215 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 FUBP3Q96I24 572 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPNE3-213ENST00000622183 RTFDC1Q9BY42 306 aaPredicted RBP6.56□□□□□ -1.36
CPNE3-213ENST00000622183 ZDHHC5Q9C0B5 715 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 RIC8BQ9NVN3 520 aa6.56□□□□□ -1.36
CPNE3-213ENST00000622183 NOC2LQ9Y3T9 749 aaKnown RBP6.56□□□□□ -1.36
CPNE3-213ENST00000622183 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 MT-CO1P00395 513 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 CFBP00751 764 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 RBP3P10745 1247 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 ZNF792Q3KQV3 632 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 FRMD7Q6ZUT3 714 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 MILR1Q7Z6M3 343 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 NME9Q86XW9 330 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 CHPFQ8IZ52 775 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 C1orf162Q8NEQ5 155 aaPredicted RBP6.55□□□□□ -1.36
CPNE3-213ENST00000622183 CCDC136Q96JN2 1154 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 MS4A5Q9H3V2 200 aa6.55□□□□□ -1.36
CPNE3-213ENST00000622183 USP36Q9P275 1121 aaKnown RBP6.55□□□□□ -1.36
CPNE3-213ENST00000622183 YBX2Q9Y2T7 364 aaKnown RBP6.55□□□□□ -1.36
CPNE3-213ENST00000622183 TRIM75PA6NK02 468 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
CPNE3-213ENST00000622183 FOXP2O15409 715 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 KDM1AO60341 852 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 ZBTB7AO95365 584 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 GALK1P51570 392 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 SCAND1P57086 179 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 HERVK_113P62684 666 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 SLC9A5Q14940 896 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 NR1I3Q14994 352 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 WDR75Q8IWA0 830 aaKnown RBP6.54□□□□□ -1.36
CPNE3-213ENST00000622183 SIRT2Q8IXJ6 389 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 LMBR1Q8WVP7 490 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 FAXDC2Q96IV6 333 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 RNF32Q9H0A6 362 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 TCF7L1Q9HCS4 588 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
CPNE3-213ENST00000622183 ZC3H12DA2A288 527 aaKnown RBP6.53□□□□□ -1.36
CPNE3-213ENST00000622183 PRAMEF25A6NGN4 478 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 RASSF10A6NK89 507 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ACOT7O00154 380 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ADCY1Q08828 1119 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 PDCD1Q15116 288 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 NXNQ6DKJ4 435 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 PGM2L1Q6PCE3 622 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 CMIPQ8IY22 773 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ABHD4Q8TB40 342 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 TSPAN17Q96FV3 270 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ZNF496Q96IT1 587 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-213ENST00000622183 ACAP3Q96P50 834 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 RHOBTB2Q9BYZ6 727 aa6.53□□□□□ -1.36
CPNE3-213ENST00000622183 RC3H2Q9HBD1 1191 aaKnown RBP6.53□□□□□ -1.36
CPNE3-213ENST00000622183 LUC7LQ9NQ29 371 aaKnown RBP6.53□□□□□ -1.36
CPNE3-213ENST00000622183 LUC7L2Q9Y383 392 aaKnown RBP6.53□□□□□ -1.36
CPNE3-213ENST00000622183 GOLGA8AA7E2F4 631 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 GOLGA8BA8MQT2 603 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 KIF3BO15066 747 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 RFPL1O75677 317 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 SNUPNO95149 360 aaKnown RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 MPOP05164 745 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 MMEP08473 750 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 TMEM253P0C7T8 217 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 CCND1P24385 295 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 AFMP43652 599 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 RECQLP46063 649 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 GPR3P46089 330 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 TBX4P57082 545 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 PCBP2Q15366 365 aaKnown RBP eCLIP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 PAN2Q504Q3 1202 aaKnown RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 TMEM240Q5SV17 173 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 FAM102BQ5T8I3 360 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 TCEAL8Q8IYN2 117 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 JPH3Q8WXH2 748 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 ASB15Q8WXK1 588 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 RTF1Q92541 710 aaKnown RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 ORAI2Q96SN7 254 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 MKS1Q9NXB0 559 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 MSRAQ9UJ68 235 aa6.52□□□□□ -1.37
CPNE3-213ENST00000622183 DBR1Q9UK59 544 aaKnown RBP6.52□□□□□ -1.37
CPNE3-213ENST00000622183 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-213ENST00000622183 LCHNA4D1U4 455 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 PRC1O43663 620 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 FAHP16930 419 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 MAPKAPK2P49137 400 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 PRR5P85299 388 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 GRIN1Q05586 938 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 MOGSQ13724 837 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 RPTNQ6XPR3 784 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 MYO1HQ8N1T3 1032 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms