RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 PRR16Q569H4 304 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 CAVIN3Q969G5 261 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 TTYH3Q9C0H2 523 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 GCNT4Q9P109 453 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 NEFHP12036 1026 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 GCKP35557 465 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 BTDP43251 543 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 GRB10Q13322 594 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 TAOK3Q9H2K8 898 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 SH3GLB2Q9NR46 395 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 MTRF1LQ9UGC7 380 aaKnown RBP12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 SIK3Q9Y2K2 1263 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 DAAM1Q9Y4D1 1078 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 ZNF804BA4D1E1 1349 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 NAB2Q15742 525 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 KCNK18Q7Z418 384 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 DDX20Q9UHI6 824 aaKnown RBP12.42□□□□□ -0.42
PCDHGA11-203ENST00000622044 ATRNO75882 1429 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 SPOPO43791 374 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PLA2G4BP0C869 781 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 CUL1Q13616 776 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GLYCTKQ8IVS8 523 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 C4orf32Q8N8J7 132 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GDAP1Q8TB36 358 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 LRRC15Q8TF66 581 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 RAB17Q9H0T7 212 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 VCPKMTQ9H867 229 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 ACTR5Q9H9F9 607 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PKD2L1Q9P0L9 805 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 TBK1Q9UHD2 729 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 MYH15Q9Y2K3 1946 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 TOM1O60784 492 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 CDC25CP30307 473 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GSTO1P78417 241 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 SKOR1P84550 965 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 USP17L6PQ6QN14 398 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 DPP8Q6V1X1 898 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 METTL13Q8N6R0 699 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GLG1Q92896 1179 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 ZKSCAN4Q969J2 545 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 AZI2Q9H6S1 392 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 FAM13AO94988 1023 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PRLRP16471 622 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 SNAP25P60880 206 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 DR1Q01658 176 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 QPCTQ16769 361 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
PCDHGA11-203ENST00000622044 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 A0A1W2PRG0 241 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 DCDC2CA8MYV0 355 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 AFPP02771 609 aaKnown RBP12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CDK8P49336 464 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 FIGNQ5HY92 759 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 N4BP2Q86UW6 1770 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 ACSL3O95573 720 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CPP00450 1065 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 FGFR4P22455 802 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 FLT3P36888 993 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 PRPHP41219 470 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 MESDQ14696 234 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CAPN12Q6ZSI9 719 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 CCDC50Q8IVM0 306 aa12.4□□□□□ -0.42
PCDHGA11-203ENST00000622044 SYCE1Q8N0S2 351 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms