RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SERPINB2P05120 415 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 DR1Q01658 176 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 CUL1Q13616 776 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 MAP7Q14244 749 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 NOP9Q86U38 636 aaKnown RBP9.05□□□□□ -0.96
ALMS1-208ENST00000620466 ACCSQ96QU6 501 aa9.05□□□□□ -0.96
ALMS1-208ENST00000620466 TACO1Q9BSH4 297 aaKnown RBP9.05□□□□□ -0.96
ALMS1-208ENST00000620466 LARSQ9P2J5 1176 aaKnown RBP9.05□□□□□ -0.96
ALMS1-208ENST00000620466 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.05□□□□□ -0.96
ALMS1-208ENST00000620466 HMGB1P1B2RPK0 211 aaPredicted RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ORC4O43929 436 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 CTTNQ14247 550 aaKnown RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TBC1D9BQ66K14 1250 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 CLEC4GQ6UXB4 293 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 RAD9BQ6WBX8 426 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 PALM2Q8IXS6 379 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ZNF653Q96CK0 615 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 E9PMD0 336 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 BSPRYQ5W0U4 402 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TRIM50Q86XT4 487 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ZBTB8OSQ8IWT0 167 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 MAP3K14Q99558 947 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ZNF185O15231 689 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 NT5C2P49902 561 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 SLC12A2P55011 1212 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 GRIN1Q05586 938 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 PDCLQ13371 301 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TSNAXIP1Q2TAA8 658 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 MCF2L2Q86YR7 1114 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TRIM10Q9UDY6 481 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 ADD3Q9UEY8 706 aaKnown RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 CLTAP09496 248 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 SCYL2Q6P3W7 929 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 PROM2Q8N271 834 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 RNF10Q8N5U6 811 aaKnown RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 CHP1Q99653 195 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 PVALEFA0A1B0GWK0 134 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 HOXA13P31271 388 aaPredicted RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 SLC8A1P32418 973 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 PHBP35232 272 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 FXR1P51114 621 aaKnown RBP eCLIP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 IGBP1P78318 339 aa9.04□□□□□ -0.96
ALMS1-208ENST00000620466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
ALMS1-208ENST00000620466 OVOS2A0A0G2JMS6 1433 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 ECEL1O95672 775 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CYP2C19P33261 490 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 TNFAIP1Q13829 316 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 KCNB1Q14721 858 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 FAM196AQ6ZSG2 479 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 KANSL2Q9H9L4 492 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 TARSL2A2RTX5 802 aaKnown RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 TROVE2P10155 538 aaKnown RBP eCLIP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 ALKBH5Q6P6C2 394 aaKnown RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 KSR1Q8IVT5 923 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 REXO1L1PQ8IX06 675 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 POMGNT1Q8WZA1 660 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 NT5C1BQ96P26 610 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 NACC1Q96RE7 527 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CNOT10Q9H9A5 744 aaKnown RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 IFNB1P01574 187 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 MAPK4P31152 587 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 MAGEA9P43362 315 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SLCO1A2P46721 670 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 PSMD6Q15008 389 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 LGSNQ5TDP6 509 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SDCCAG8Q86SQ7 713 aaPredicted RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CEP120Q8N960 986 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CEP95Q96GE4 821 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CAPN9O14815 690 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 BMP3P12645 472 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SGO2Q562F6 1265 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 ZMYND12Q9H0C1 365 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 DBNDD1Q9H9R9 158 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 KIF9Q9HAQ2 790 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 PXDNQ92626 1479 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SEPT6Q14141 434 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 FAM160B1Q5W0V3 765 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 PDXDC1Q6P996 788 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 SFR1Q86XK3 245 aa9.03□□□□□ -0.96
ALMS1-208ENST00000620466 NOC2LQ9Y3T9 749 aaKnown RBP9.03□□□□□ -0.96
ALMS1-208ENST00000620466 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.96
ALMS1-208ENST00000620466 ZSCAN20P17040 1043 aaPredicted RBP9.02□□□□□ -0.96
ALMS1-208ENST00000620466 ADCY1Q08828 1119 aa9.02□□□□□ -0.96
ALMS1-208ENST00000620466 TAB3Q8N5C8 712 aaPredicted RBP9.02□□□□□ -0.96
ALMS1-208ENST00000620466 CSRNP1Q96S65 589 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms