RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 A0A1B0GUL7 405 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 CLRN2A0PK11 232 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 SLC5A1P13866 664 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.94
CBWD1-228ENST00000619157 CAVIN4Q5BKX8 364 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 RALGPS1Q5JS13 557 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 C22orf34Q6ZV56 151 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 TTF2Q9UNY4 1162 aaKnown RBP9.21□□□□□ -0.94
CBWD1-228ENST00000619157 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 HDAC5Q9UQL6 1122 aa9.21□□□□□ -0.94
CBWD1-228ENST00000619157 WDR33Q9C0J8 1336 aaKnown RBP9.21□□□□□ -0.94
CBWD1-228ENST00000619157 CELA3AP09093 270 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 RAC2P15153 192 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 PRDX5P30044 214 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 GSTT1P30711 240 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 CRKP46108 304 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 MMP14P50281 582 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 HK2P52789 917 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 PTPN11Q06124 597 aaPredicted RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 RASGRF1Q13972 1273 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 DLGAP5Q15398 846 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 VPS37DQ86XT2 251 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 PLPPR2Q96GM1 343 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 CAPNS2Q96L46 248 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 CEP44Q9C0F1 390 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 GBA2Q9HCG7 927 aaPredicted RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 ZBTB40Q9NUA8 1239 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 HDAC9Q9UKV0 1011 aa9.2□□□□□ -0.94
CBWD1-228ENST00000619157 SMG5Q9UPR3 1016 aaKnown RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 NOP58Q9Y2X3 529 aaKnown RBP9.2□□□□□ -0.94
CBWD1-228ENST00000619157 NUAK1O60285 661 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 HUNKP57058 714 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 LRRC14Q15048 493 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 APOBEC3HQ6NTF7 200 aaKnown RBP9.19□□□□□ -0.94
CBWD1-228ENST00000619157 LETMD1Q6P1Q0 360 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 CCDC120Q96HB5 630 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 HHIPL1Q96JK4 782 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
CBWD1-228ENST00000619157 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
CBWD1-228ENST00000619157 ZNF70Q9UC06 446 aaPredicted RBP9.19□□□□□ -0.94
CBWD1-228ENST00000619157 RAPGEFL1Q9UHV5 662 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 ECM29Q5VYK3 1845 aa9.19□□□□□ -0.94
CBWD1-228ENST00000619157 FOXN1O15353 648 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 MED14OSP0DP75 135 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 CACNB3P54284 484 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 GRM1Q13255 1194 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 TNNI3KQ59H18 835 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-228ENST00000619157 THAP5Q7Z6K1 395 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 TBC1D22AQ8WUA7 517 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 TEPSINQ96N21 525 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 PAPPA2Q9BXP8 1791 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 HMG20BQ9P0W2 317 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 EXOC6BQ9Y2D4 811 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 FPGT-TNNI3KV9GXZ4 949 aa9.18□□□□□ -0.94
CBWD1-228ENST00000619157 WASH4PA8MWX3 477 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 UBE2Q2LH0YL09 131 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 FRAT2O75474 233 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 SURF6O75683 361 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 TRHRP34981 398 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 MCAMP43121 646 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 CDK8P49336 464 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 RBM5P52756 815 aaKnown RBP eCLIP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 LINC00310P59036 64 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 HDLBPQ00341 1268 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 G3BP1Q13283 466 aaKnown RBP eCLIP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 RASA3Q14644 834 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 ENOX2Q16206 610 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 NBPF12Q5TAG4 269 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 PRAMEF13Q5VWM6 474 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 RASAL3Q86YV0 1011 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 APOBEC3FQ8IUX4 373 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 WDR66Q8TBY9 1149 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 MYLIPQ8WY64 445 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 EAF2Q96CJ1 260 aaPredicted RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 ZDHHC15Q96MV8 337 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 NEUROD6Q96NK8 337 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 MRIQ9BWK5 157 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 IRF2BPLQ9H1B7 796 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 VEZTQ9HBM0 779 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 GPR108Q9NPR9 543 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 DBNLQ9UJU6 430 aaKnown RBP9.17□□□□□ -0.94
CBWD1-228ENST00000619157 DDX19BQ9UMR2 479 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
CBWD1-228ENST00000619157 PDS5AQ29RF7 1337 aaKnown RBP9.16□□□□□ -0.94
CBWD1-228ENST00000619157 GLDCP23378 1020 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 TNK2Q07912 1038 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 PRKG1Q13976 671 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 RGMBQ6NW40 437 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 C2orf69Q8N8R5 385 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 KCNN1Q92952 543 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 WNT10AQ9GZT5 417 aa9.16□□□□□ -0.94
CBWD1-228ENST00000619157 TMEM39BQ9GZU3 492 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms