RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 LMBR1Q8WVP7 490 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
SHANK2-221ENST00000618363 ZNF577Q9BSK1 485 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 PRDM12Q9H4Q4 367 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 VPS54Q9P1Q0 977 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 YBX2Q9Y2T7 364 aaKnown RBP13.3□□□□□ -0.28
SHANK2-221ENST00000618363 MYO9BQ13459 2157 aa13.3□□□□□ -0.28
SHANK2-221ENST00000618363 M0QZ92 97 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 DDX39AO00148 427 aaKnown RBP13.29□□□□□ -0.28
SHANK2-221ENST00000618363 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
SHANK2-221ENST00000618363 AMHP03971 560 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 HOXC8P31273 242 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 SLC26A2P50443 739 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 WDR5P61964 334 aaKnown RBP13.29□□□□□ -0.28
SHANK2-221ENST00000618363 HIC1Q14526 733 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 GRIK4Q16099 956 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 MIS18BP1Q6P0N0 1132 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 PLPPR4Q7Z2D5 763 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 WNT8BQ93098 351 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 TBC1D22BQ9NU19 505 aa13.29□□□□□ -0.28
SHANK2-221ENST00000618363 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-221ENST00000618363 CA3P07451 260 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 MYOGP15173 224 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 PRR16Q569H4 304 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHANK2-221ENST00000618363 CKAP2LQ8IYA6 745 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 FAM177A1Q8N128 213 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-221ENST00000618363 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 APBB2Q92870 758 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 TELO2Q9Y4R8 837 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
SHANK2-221ENST00000618363 TET1Q8NFU7 2136 aa13.27□□□□□ -0.28
SHANK2-221ENST00000618363 POTEB3A0JP26 581 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 FAM86B1E9PN63 330 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 INSRRP14616 1297 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 USP11P51784 963 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 ITGB3BPQ13352 177 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-221ENST00000618363 IER5Q5VY09 327 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 PDXDC2PQ6P474 469 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 POTEBQ6S5H4 581 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 RASGRP4Q8TDF6 673 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 WASF1Q92558 559 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 RAD9AQ99638 391 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-221ENST00000618363 ZNF302Q9NR11 478 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.29
SHANK2-221ENST00000618363 HBP1O60381 514 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 PSAPP07602 524 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 ADAM17P78536 824 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 DEFB103AP81534 67 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 KRT76Q01546 638 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 GPNMBQ14956 572 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 PLEKHG4Q58EX7 1191 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 ZNF746Q6NUN9 644 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-221ENST00000618363 FAM117BQ6P1L5 589 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 RPAINQ86UA6 219 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-221ENST00000618363 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-221ENST00000618363 BLIDQ8IZY5 108 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 DNAJB3Q8WWF6 145 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 UIMC1Q96RL1 719 aa13.26□□□□□ -0.29
SHANK2-221ENST00000618363 IFIH1Q9BYX4 1025 aaKnown RBP13.26□□□□□ -0.29
SHANK2-221ENST00000618363 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-221ENST00000618363 GBF1Q92538 1859 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 IGLV3-22A0A075B6J6 115 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 DLL1O00548 723 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 ATG7O95352 703 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 GJB5O95377 273 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 CIITAP33076 1130 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 PLCB4Q15147 1175 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 FAM26DQ5JW98 314 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 ABHD15Q6UXT9 468 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 TBCKQ8TEA7 893 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 PCYT2Q99447 389 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 CERS4Q9HA82 394 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 INSL6Q9Y581 213 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 PCDHA10Q9Y5I2 948 aa13.25□□□□□ -0.29
SHANK2-221ENST00000618363 CCDC194A0A1B0GVG4 234 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-221ENST00000618363 PFKFB2O60825 505 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 GAS7O60861 476 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 UPP2O95045 317 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 GHRP10912 638 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 MRPS6P82932 125 aaKnown RBP13.24□□□□□ -0.29
SHANK2-221ENST00000618363 SCRN1Q12765 414 aa13.24□□□□□ -0.29
SHANK2-221ENST00000618363 NONOQ15233 471 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHANK2-221ENST00000618363 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-221ENST00000618363 ZNF484Q5JVG2 852 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms