RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 FAM86B2P0C5J1 330 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 ACTR2P61160 394 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 MGAT3Q09327 533 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 GRB10Q13322 594 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 TJAP1Q5JTD0 557 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 JAKMIP3Q5VZ66 844 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 ATXN2LQ8WWM7 1075 aaKnown RBP25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 SEPT8Q92599 483 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 PHKBQ93100 1093 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 ZMYND12Q9H0C1 365 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 GLT8D2Q9H1C3 349 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 TUBE1Q9UJT0 475 aa25.36■■□□□ 1.65
NEDD4L-237ENST00000617539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 PRPF3O43395 683 aaKnown RBP25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 EVCP57679 992 aa25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 TAF2Q6P1X5 1199 aa25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 MYOCDQ8IZQ8 938 aa25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 SDF4Q9BRK5 362 aa25.35■■□□□ 1.65
NEDD4L-237ENST00000617539 LOXHD1Q8IVV2 1947 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 IGLV3-22A0A075B6J6 115 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 PPFIA3O75145 1194 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 CCNE2O96020 404 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 AMHP03971 560 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 HTRA4P83105 476 aaPredicted RBP25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 NIPA1Q7RTP0 329 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 GDPD5Q8WTR4 605 aa25.34■■□□□ 1.65
NEDD4L-237ENST00000617539 COL4A6Q14031 1691 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 ATG7O95352 703 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 INSRRP14616 1297 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 PDIA3P30101 505 aaKnown RBP25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 ERVK-21P61565 698 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 TOB2Q14106 344 aaPredicted RBP25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 ASB2Q96Q27 587 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 IFIH1Q9BYX4 1025 aaKnown RBP25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 NCOA5Q9HCD5 579 aaKnown RBP25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 MTUS1Q9ULD2 1270 aa25.33■■□□□ 1.65
NEDD4L-237ENST00000617539 GTPBP6O43824 516 aaPredicted RBP25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 CYP3A4P08684 503 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 GHRP10912 638 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 PSMA5P28066 241 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 IGBP1P78318 339 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 PLCB4Q15147 1175 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 SP7Q8TDD2 431 aaPredicted RBP25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 DNAJB3Q8WWF6 145 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 SYMPKQ92797 1274 aaKnown RBP25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 SUGCTQ9HAC7 445 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 ZSWIM6Q9HCJ5 1215 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 INSL6Q9Y581 213 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 NLRC5Q86WI3 1866 aa25.32■■□□□ 1.64
NEDD4L-237ENST00000617539 IGKV6D-21A0A0A0MT36 114 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 DHX15O43143 795 aaKnown RBP25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 EPB41L2O43491 1005 aaKnown RBP25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 LPIN1Q14693 890 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 RUFY3Q7L099 469 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 PLPPR4Q7Z2D5 763 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 REXO1Q8N1G1 1221 aaKnown RBP25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 TRAPPC12Q8WVT3 735 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 APBB2Q92870 758 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 TOP1MTQ969P6 601 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 UIMC1Q96RL1 719 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 TGS1Q96RS0 853 aaKnown RBP25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 RNF26Q9BY78 433 aaPredicted RBP25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 AZI2Q9H6S1 392 aa25.31■■□□□ 1.64
NEDD4L-237ENST00000617539 WDR81Q562E7 1941 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 DDX39AO00148 427 aaKnown RBP25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 IFNAR1P17181 557 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 ZNF76P36508 570 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 STAT5BP51692 787 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 CCT2P78371 535 aaKnown RBP25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 TFF2Q03403 129 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 PLA2G4DQ86XP0 818 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 RASGRP4Q8TDF6 673 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 C17orf80Q9BSJ5 609 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 C6orf50Q9HD87 102 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 TRPC6Q9Y210 931 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 CDY2AQ9Y6F7 541 aa25.3■■□□□ 1.64
NEDD4L-237ENST00000617539 RRN3P2A6NIE6 340 aa25.29■■□□□ 1.64
NEDD4L-237ENST00000617539 MRPS5P82675 430 aaKnown RBP25.29■■□□□ 1.64
NEDD4L-237ENST00000617539 ABHD15Q6UXT9 468 aa25.29■■□□□ 1.64
NEDD4L-237ENST00000617539 CCDC12Q8WUD4 166 aaPredicted RBP25.29■■□□□ 1.64
NEDD4L-237ENST00000617539 EDIL3O43854 480 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 UPP2O95045 317 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 FBXO47Q5MNV8 452 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 RSPH3Q86UC2 560 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 CCDC60Q8IWA6 550 aaPredicted RBP25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 FAM49AQ9H0Q0 323 aaPredicted RBP25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 VPS54Q9P1Q0 977 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 RALGAPA2Q2PPJ7 1873 aa25.28■■□□□ 1.64
NEDD4L-237ENST00000617539 TCF20Q9UGU0 1960 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 IPO5O00410 1097 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 MRPS6P82932 125 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 LENG9Q96B70 501 aa25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 LARP6Q9BRS8 491 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 UPF3BQ9BZI7 483 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 AGO3Q9H9G7 860 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 MYH9P35579 1960 aaKnown RBP25.27■■□□□ 1.64
NEDD4L-237ENST00000617539 POTEB3A0JP26 581 aa25.26■■□□□ 1.63
NEDD4L-237ENST00000617539 GNA11P29992 359 aa25.26■■□□□ 1.63
NEDD4L-237ENST00000617539 AKAP17AQ02040 695 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms