RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 BIRC2Q13490 618 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 UNC13DQ70J99 1090 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 PROM2Q8N271 834 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ORAI2Q96SN7 254 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 EPN3Q9H201 632 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 IGSF1Q8N6C5 1336 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 STK36Q9NRP7 1315 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIM49BA6NDI0 452 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 EIF3HO15372 352 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 TTI1O43156 1089 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ATP1A1P05023 1023 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 BRAFP15056 766 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ELF1P32519 619 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 PRCPP42785 496 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 INPP1P49441 399 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 FBXW10Q5XX13 1052 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 NACC1Q96RE7 527 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ORC6Q9Y5N6 252 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 GNGT2O14610 69 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 PRKAB2O43741 272 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 BTDP43251 543 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 GTF2IP78347 998 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 IRX1P78414 480 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 TMPRSS15P98073 1019 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 CDR2Q01850 454 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 GRAMD1AQ96CP6 724 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 EIF2AQ9BY44 585 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 SLITRK6Q9H5Y7 841 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 SAYSD1Q9NPB0 183 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 A0A1W2PQC6 194 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 PFDN6O15212 129 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 CASP1P29466 404 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 MDH1P40925 334 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 DYNLT1P63172 113 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 ICA1Q05084 483 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 DARS2Q6PI48 645 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 TTC17Q96AE7 1141 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 OLFM3Q96PB7 478 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 WDR11Q9BZH6 1224 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 GINM1Q9NU53 330 aa11.47□□□□□ -0.57
CLTCL1-209ENST00000617103 LRRIQ4A6NIV6 560 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 CERKLQ49MI3 558 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 PI16Q6UXB8 463 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 MCUQ8NE86 351 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 IPO11Q9UI26 975 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 MTF1Q14872 753 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 BRDTQ58F21 947 aaPredicted RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 STAMBPL1Q96FJ0 436 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 CALR3Q96L12 384 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 CCT8L2Q96SF2 557 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 PARVGQ9HBI0 331 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 SUFUQ9UMX1 484 aa11.46□□□□□ -0.57
CLTCL1-209ENST00000617103 MAP3K15Q6ZN16 1313 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 FAM187AA6NFU0 413 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 COPEO14579 308 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 PRPSAP1Q14558 356 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 GRAMD4Q6IC98 578 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 RAB44Q7Z6P3 723 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 DCLK2Q8N568 766 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 CCDC17Q96LX7 622 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 FGD4Q96M96 766 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 TGS1Q96RS0 853 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 CALN1Q9BXU9 219 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 ARHGAP10A1A4S6 786 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 NCK2O43639 380 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 ALAS1P13196 640 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 IL1RL1Q01638 556 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 TTC25Q96NG3 672 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 PIGSQ96S52 555 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.58
CLTCL1-209ENST00000617103 WDR19Q8NEZ3 1342 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 AP2B1P63010 937 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 FAM83BQ5T0W9 1011 aa11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 ZNF473Q8WTR7 871 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-209ENST00000617103 PCIF1Q9H4Z3 704 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms