RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SLC9A2Q9UBY0 812 aa23.77■■□□□ 1.4
TRAPPC3-208ENST00000616074 LOXHD1Q8IVV2 1947 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 RTN1Q16799 776 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 PTPROQ16827 1216 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 ADCK5Q3MIX3 580 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 PPP1R18Q6NYC8 613 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 RASEFQ8IZ41 740 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 CDY2AQ9Y6F7 541 aa23.76■■□□□ 1.39
TRAPPC3-208ENST00000616074 ZBTB43O43298 467 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 INSRRP14616 1297 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 KCNA5P22460 613 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 FBXO47Q5MNV8 452 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 DHX32Q7L7V1 743 aaKnown RBP23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 IL17RAQ96F46 866 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 C1QTNF1Q9BXJ1 281 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 ANO3Q9BYT9 981 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 EPHX3Q9H6B9 360 aa23.75■■□□□ 1.39
TRAPPC3-208ENST00000616074 TTC3P53804 2025 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 STXBP3O00186 592 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 ARP10275 920 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 ADCY7P51828 1080 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 LEXMQ3ZCV2 418 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 TIGD5Q53EQ6 642 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 FIBCD1Q8N539 461 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 AZI2Q9H6S1 392 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 RC3H2Q9HBD1 1191 aaKnown RBP23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 V9GY48 417 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 NFASCO94856 1347 aa23.74■■□□□ 1.39
TRAPPC3-208ENST00000616074 RRN3P2A6NIE6 340 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 ENPP3O14638 875 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 LINC00271P0C7V0 271 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 ACTR2P61160 394 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 MRPS6P82932 125 aaKnown RBP23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 ITGB3BPQ13352 177 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 TSGA10IPQ3SY00 556 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 CEP55Q53EZ4 464 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 TSHZ1Q6ZSZ6 1077 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 BANK1Q8NDB2 785 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 KHSRPQ92945 711 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 SDF4Q9BRK5 362 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 FAM49AQ9H0Q0 323 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 TMEM260Q9NX78 707 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 TRPC6Q9Y210 931 aa23.73■■□□□ 1.39
TRAPPC3-208ENST00000616074 KLF18A0A0U1RQI7 1052 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 SMCO2A6NFE2 343 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 GOLGA8AA7E2F4 631 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 GOLGA8BA8MQT2 603 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 hCG_1984214I3L0E3 225 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 FOSP01100 380 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 CDC27P30260 824 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 CTNNB1P35222 781 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 PLCB4Q15147 1175 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 TEX2Q8IWB9 1127 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 ZNF713Q8N859 430 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 TRAPPC12Q8WVT3 735 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 LINC01599Q8WXQ3 324 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 AGO3Q9H9G7 860 aaKnown RBP23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 AGO4Q9HCK5 861 aaKnown RBP23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 CD320Q9NPF0 282 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 FAM217BQ9NTX9 383 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 BARHL2Q9NY43 387 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 ADGRA3Q8IWK6 1321 aa23.72■■□□□ 1.39
TRAPPC3-208ENST00000616074 IL9P15248 144 aa23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 CD52P31358 61 aa23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 CLK2P49760 499 aaKnown RBP23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 TCEAL5Q5H9L2 206 aa23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 CENPQQ7L2Z9 268 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 PLPPR4Q7Z2D5 763 aa23.71■■□□□ 1.39
TRAPPC3-208ENST00000616074 KIAA1671Q9BY89 1806 aa23.7■■□□□ 1.39
TRAPPC3-208ENST00000616074 MYO7AQ13402 2215 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 C5orf67F2Z3F1 127 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 RPLP2P05387 115 aaKnown RBP23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 SREBF1P36956 1147 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 STAT5BP51692 787 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 TMEM62Q0P6H9 643 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 AP3B2Q13367 1082 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 IER5Q5VY09 327 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 NEK9Q8TD19 979 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 ZNF689Q96CS4 500 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 NSUN3Q9H649 340 aaKnown RBP23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 TRPV2Q9Y5S1 764 aa23.7■■□□□ 1.38
TRAPPC3-208ENST00000616074 MEIS1O00470 390 aa23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 CDC45O75419 566 aa23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 KRT32Q14532 448 aa23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 PTCRAQ6ISU1 281 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 TNPO1Q92973 898 aaKnown RBP23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 PCDHA2Q9Y5H9 948 aa23.69■■□□□ 1.38
TRAPPC3-208ENST00000616074 H3BQ06 376 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 DDX39AO00148 427 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 ATG7O95352 703 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 RB1P06400 928 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 BMPR1AP36894 532 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 RTN4RL1Q86UN2 441 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 FAM178BQ8IXR5 827 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 CLP1Q92989 425 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 PABPC5Q96DU9 382 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 GLT8D2Q9H1C3 349 aa23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 NAP1L2Q9ULW6 460 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC3-208ENST00000616074 RWDD3Q9Y3V2 267 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms