RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MTFR1LQ9H019 292 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 IFI35P80217 286 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADCY1Q08828 1119 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 INTS8Q75QN2 995 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 LRRC4CQ9HCJ2 640 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 F8VZ95 297 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 H7C1W4 665 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 PAEPP09466 180 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 LIFRP42702 1097 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF131P52739 623 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADAM9Q13443 819 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 GBP7Q8N8V2 638 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 KRT23Q9C075 422 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 KLHL14Q9P2G3 628 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 KIF1AQ12756 1690 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 MAP3K13O43283 966 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 PFDN1O60925 122 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 MTHFD1LQ6UB35 978 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 MYLK4Q86YV6 388 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 DNAJC9Q8WXX5 260 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 HPS3Q969F9 1004 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.6
TNFAIP3-208ENST00000615468 AFF2P51816 1311 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZNF532Q9HCE3 1301 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 SERPINB4P48594 390 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 DYNC1I2Q13409 638 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 TMC3Q7Z5M5 1100 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZC3H18Q86VM9 953 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZNF317Q96PQ6 595 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 CCNE1P24864 410 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 EPS15P42566 896 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 EIF3BP55884 814 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 RCN2Q14257 317 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 SEPT14Q6ZU15 432 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 NKX1-2Q9UD57 310 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-208ENST00000615468 LOC102724428A0A0B4J2F2 783 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 ITGA4P13612 1032 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 SIK1P57059 783 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 RABL6Q3YEC7 729 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 ZNF449Q6P9G9 518 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 NEK9Q8TD19 979 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 JAG2Q9Y219 1238 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 SNX3O60493 162 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 KRT13P13646 458 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 POLR2FP61218 127 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 CDK17Q00537 523 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 KLHL30Q0D2K2 578 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 PEX26Q7Z412 305 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 PIGWQ7Z7B1 504 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 DHTKD1Q96HY7 919 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 PACSIN1Q9BY11 444 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 NKRFO15226 690 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 FCER1AP12319 257 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 SETDB1Q15047 1291 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 DTHD1Q6ZMT9 781 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 DUSP9Q99956 384 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 CNNM2Q9H8M5 875 aa11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
TNFAIP3-208ENST00000615468 MBD4O95243 580 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 SP100P23497 879 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ACBD5Q5T8D3 534 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 CEP128Q6ZU80 1094 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 KIFAP3Q92845 792 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 CLSTN1O94985 981 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 STK4Q13043 487 aa11.25□□□□□ -0.61
TNFAIP3-208ENST00000615468 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms