RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
VPS11-206ENST00000614944 UHMK1Q8TAS1 419 aaKnown RBP9.71□□□□□ -0.86
VPS11-206ENST00000614944 MRPS27Q92552 414 aaKnown RBP9.71□□□□□ -0.86
VPS11-206ENST00000614944 AK8Q96MA6 479 aa9.71□□□□□ -0.86
VPS11-206ENST00000614944 ATP8A1Q9Y2Q0 1164 aa9.71□□□□□ -0.86
VPS11-206ENST00000614944 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 ZNF536O15090 1300 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 TBX3O15119 743 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 GBP2P32456 591 aaPredicted RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 DSG3P32926 999 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 LONP1P36776 959 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 VGLL4Q14135 290 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 MAMSTRQ6ZN01 415 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 MAB21L3Q8N8X9 362 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 OSBPL9Q96SU4 736 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 PSTPIP2Q9H939 334 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 PCDHA1Q9Y5I3 950 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 ADM5C9JUS6 153 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 PEX14O75381 377 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 EARS2Q5JPH6 523 aaKnown RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 CCDC65Q8IXS2 484 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 KIRREL3Q8IZU9 778 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 FMR1NBQ8N0W7 255 aaPredicted RBP9.7□□□□□ -0.86
VPS11-206ENST00000614944 CLSTN2Q9H4D0 955 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 EHMT1Q9H9B1 1298 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 TRPV5Q9NQA5 729 aa9.7□□□□□ -0.86
VPS11-206ENST00000614944 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 MEIS2O14770 477 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 VDRP11473 427 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 IBSPP21815 317 aaPredicted RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 SREBF1P36956 1147 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 LRMPQ12912 555 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 SNW1Q13573 536 aaKnown RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 Q4G0T1 1027 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 XRRA1Q6P2D8 792 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 RBM41Q96IZ5 413 aaKnown RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS11-206ENST00000614944 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 LOXHD1Q8IVV2 1947 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 GOLGA6L4A6NEF3 574 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 OPLAHO14841 1288 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 STK10O94804 968 aaKnown RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 TPPPO94811 219 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 MTMR2Q13614 643 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 CAPRIN2Q6IMN6 1127 aaKnown RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 BHMTQ93088 406 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 RUFY1Q96T51 708 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 GLIS2Q9BZE0 524 aaPredicted RBP9.69□□□□□ -0.86
VPS11-206ENST00000614944 HOXC10Q9NYD6 342 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 DNAI1Q9UI46 699 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 N6AMT1Q9Y5N5 214 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 LRRC37A2A6NM11 1700 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 hCG_1642624A0A1W2PR95 340 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 SLC16A2P36021 539 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 KBTBD12Q3ZCT8 623 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 PIK3AP1Q6ZUJ8 805 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 ARFGAP3Q9NP61 516 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 UBAP1Q9NZ09 502 aa9.69□□□□□ -0.86
VPS11-206ENST00000614944 ZEB2O60315 1214 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 ZBED4O75132 1171 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS11-206ENST00000614944 ROR2Q01974 943 aaKnown RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 COG2Q14746 738 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 CC2D1AQ6P1N0 951 aaPredicted RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 FASTKD5Q7L8L6 764 aaKnown RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 HOMER1Q86YM7 354 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 ATP11CQ8NB49 1132 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 KCNN1Q92952 543 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 RSRC1Q96IZ7 334 aaKnown RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 ALS2CR12Q96Q35 445 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 MTMR9Q96QG7 549 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 L2HGDHQ9H9P8 463 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 MAGEF1Q9HAY2 307 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 BARX2Q9UMQ3 279 aaPredicted RBP9.68□□□□□ -0.86
VPS11-206ENST00000614944 CAPN7Q9Y6W3 813 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 FAM169AQ9Y6X4 670 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 DTNBO60941 627 aa9.68□□□□□ -0.86
VPS11-206ENST00000614944 ME1P48163 572 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms