RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SPAG1Q07617 926 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 UGCGQ16739 394 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TCERG1LQ5VWI1 586 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CENPPQ6IPU0 288 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 RAD9BQ6WBX8 426 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SYT2Q8N9I0 419 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 ACRBPQ8NEB7 543 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SLC5A5Q92911 643 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CCDC43Q96MW1 224 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 BTBD7Q9P203 1132 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 DNAI1Q9UI46 699 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PCDHB13Q9Y5F0 798 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 KIF13BQ9NQT8 1826 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 SSC5DA1L4H1 1573 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 ARHGEF35A5YM69 484 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TISP43B9A030 160 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 C19orf81C9J6K1 198 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 EPHB6O15197 1021 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TPM1P09493 284 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CYP2C8P10632 490 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 IRX3P78415 501 aaPredicted RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 ARID5AQ03989 594 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 ADAM9Q13443 819 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 DCAF17Q5H9S7 520 aaPredicted RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 ODR4Q5SWX8 454 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 MCTP2Q6DN12 878 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TMEM139Q8IV31 216 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 GUF1Q8N442 669 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 TSG101Q99816 390 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TEX13BQ9BXU2 312 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 LRRC27Q9C0I9 530 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 THAP9Q9H5L6 903 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 AGO4Q9HCK5 861 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 NLRC4Q9NPP4 1024 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 HOXC10Q9NYD6 342 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 USP20Q9Y2K6 914 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PSME4Q14997 1843 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 LRRC10BA6NIK2 292 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 LGALS16A8MUM7 142 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 DHX15O43143 795 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 MFAP3LO75121 409 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 EYA4O95677 639 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CCNE2O96020 404 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TPM2P07951 284 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 NR2F2P24468 414 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 NF2P35240 595 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PBX1P40424 430 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 IREB2P48200 963 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 CASP4P49662 377 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 Q3C1V9 767 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 MIIPQ5JXC2 388 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 HYIQ5T013 277 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 SWSAP1Q6NVH7 229 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 OPTNQ96CV9 577 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 KIFC3Q9BVG8 833 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 NDST4Q9H3R1 872 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PCIF1Q9H4Z3 704 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CYP39A1Q9NYL5 469 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PPP2R2CQ9Y2T4 447 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 LUC7L2Q9Y383 392 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 RASSF10A6NK89 507 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 BACH1O14867 736 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 HIP1RO75146 1068 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 RGS20O76081 388 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 EEF1GP26641 437 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 HOXD13P35453 343 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CYP2J2P51589 502 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 GNG11P61952 73 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 ERVK-24P63145 666 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 EHHADHQ08426 723 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PPP2R5CQ13362 524 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 EPHA7Q15375 998 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 XKR9Q5GH70 373 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CT47A1Q5JQC4 288 aaPredicted RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 FKBP15Q5T1M5 1219 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PCNX4Q63HM2 1172 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PADI6Q6TGC4 694 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 NLRX1Q86UT6 975 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 FAM178BQ8IXR5 827 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 REPS2Q8NFH8 660 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 ZNF507Q8TCN5 953 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 NACC1Q96RE7 527 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 POLR3CQ9BUI4 534 aaPredicted RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 ACAD9Q9H845 621 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 TXNRD2Q9NNW7 524 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 ABHD10Q9NUJ1 306 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 PCDHA2Q9Y5H9 948 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.8□□□□□ -1.8
LIG4-205ENST00000614526 UBIAD1Q9Y5Z9 338 aa3.8□□□□□ -1.8
LIG4-205ENST00000614526 BRCA1P38398 1863 aaKnown RBP3.8□□□□□ -1.8
LIG4-205ENST00000614526 CEP350Q5VT06 3117 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CCDC169A6NNP5 214 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ARHGAP6O43182 974 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 PLEKP08567 350 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 ACTN1P12814 892 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 DNM2P50570 870 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 FKBP3Q00688 224 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms