RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TRMT13Q9NUP7 481 aaKnown RBP12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
CCL3L3-201ENST00000612839 TRIP12Q14669 1992 aaPredicted RBP12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 LGR5O75473 907 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 PSMD10O75832 226 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 ITGB8P26012 769 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 HIC1Q14526 733 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 ABHD15Q6UXT9 468 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 CTAGE1Q96RT6 745 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 NAP1L4Q99733 375 aaKnown RBP12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 TMEM39AQ9NV64 488 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 HDAC6Q9UBN7 1215 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 ZNF215Q9UL58 517 aaPredicted RBP12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 EMSYQ7Z589 1322 aa12.81□□□□□ -0.36
CCL3L3-201ENST00000612839 CEP290O15078 2479 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 TLR3O15455 904 aaKnown RBP12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 KRT76Q01546 638 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 LARP1BQ659C4 914 aaKnown RBP12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 GDF6Q6KF10 455 aaPredicted RBP12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 B3GNT9Q6UX72 402 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 HAS1Q92839 578 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 SMARCAD1Q9H4L7 1026 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
CCL3L3-201ENST00000612839 H3BQV1 296 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 TBX3O15119 743 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 GAS7O60861 476 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 SUPT20HL2P0C7V6 817 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 SMIM10L2AP0DMW4 78 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 SMIM10L2BP0DMW5 78 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 MARK3P27448 753 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 HOXC8P31273 242 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 CCDC60Q8IWA6 550 aaPredicted RBP12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 GLG1Q92896 1179 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 TEKT3Q9BXF9 490 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
CCL3L3-201ENST00000612839 CHMP2AO43633 222 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 CYP2C9P11712 490 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 ATP2B1P20020 1258 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 STAT5BP51692 787 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MDM2Q00987 491 aaPredicted RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 PTGISQ16647 500 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 SWSAP1Q6NVH7 229 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MIS18BP1Q6P0N0 1132 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 AZI2Q9H6S1 392 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 PCDHA10Q9Y5I2 948 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 WDR64B1ANS9 1081 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 NEMFO60524 1076 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 TIMP1P01033 207 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 RAG1P15918 1043 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MCM7P33993 719 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 ADAM17P78536 824 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 BADQ92934 168 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 GDF15Q99988 308 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 HIPK3Q9H422 1215 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 ZNF302Q9NR11 478 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 TCEAL9Q9UHQ7 104 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 SAMM50Q9Y512 469 aa12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 MAFBQ9Y5Q3 323 aaPredicted RBP12.78□□□□□ -0.36
CCL3L3-201ENST00000612839 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 NRCAMQ92823 1304 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 C17orf102A2RUQ5 167 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 BACH1O14867 736 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 PSAPP07602 524 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 ATP4AP20648 1035 aa12.77□□□□□ -0.37
CCL3L3-201ENST00000612839 SFNP31947 248 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms