RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FANCCQ00597 558 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 RAD51AP2Q09MP3 1159 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 COASYQ13057 564 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 HSP90AA4PQ58FG1 418 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 RGMBQ6NW40 437 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
CBWD1-220ENST00000612045 RDM1Q8NG50 284 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
CBWD1-220ENST00000612045 FGD4Q96M96 766 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
CBWD1-220ENST00000612045 GIT2Q14161 759 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
CBWD1-220ENST00000612045 REEP2Q9BRK0 252 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 BCAS3Q9H6U6 928 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
CBWD1-220ENST00000612045 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 PCDHA10Q9Y5I2 948 aa13.69□□□□□ -0.22
CBWD1-220ENST00000612045 ZNFX1Q9P2E3 1918 aaKnown RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 LYPLA2O95372 231 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 SP2Q02086 613 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 TPD52L1Q16890 204 aaPredicted RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 SPC24Q8NBT2 197 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
CBWD1-220ENST00000612045 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
CBWD1-220ENST00000612045 TRIM49BA6NDI0 452 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 SERPINC1P01008 464 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 UBASH3AP57075 661 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 PSMC5P62195 406 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 DRC7Q8IY82 874 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 GUF1Q8N442 669 aaKnown RBP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 LOXHD1Q8IVV2 1947 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 BICDL2A1A5D9 508 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 KIF3CO14782 793 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 SLC10A3P09131 477 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 CCNE1P24864 410 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 UGCGQ16739 394 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 CYFIP1Q7L576 1253 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 C4orf19Q8IY42 314 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 GLIS3Q8NEA6 775 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 P2RX5Q93086 422 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 DBR1Q9UK59 544 aaKnown RBP13.67□□□□□ -0.22
CBWD1-220ENST00000612045 TLL2Q9Y6L7 1015 aa13.67□□□□□ -0.22
CBWD1-220ENST00000612045 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 ARHGEF35A5YM69 484 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 CBFA2T2O43439 604 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 STRNO43815 780 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
CBWD1-220ENST00000612045 TGFB3P10600 412 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
CBWD1-220ENST00000612045 ADORA2AP29274 412 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
CBWD1-220ENST00000612045 ACTR2P61160 394 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 SP4Q02446 784 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 LRRC41Q15345 812 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 EEPD1Q7L9B9 569 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 TBC1D7Q9P0N9 293 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 TELO2Q9Y4R8 837 aa13.66□□□□□ -0.22
CBWD1-220ENST00000612045 ASB14A6NK59 587 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 SORBS3O60504 671 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 PSAPP07602 524 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 ZNF792Q3KQV3 632 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 MYOCDQ8IZQ8 938 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
CBWD1-220ENST00000612045 DUSP9Q99956 384 aaKnown RBP13.65□□□□□ -0.22
CBWD1-220ENST00000612045 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 GABBR1Q9UBS5 961 aa13.65□□□□□ -0.22
CBWD1-220ENST00000612045 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms