RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 MSANTD4Q8NCY6 345 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 SECISBP2LQ93073 1101 aaKnown RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 LSM14BQ9BX40 385 aaKnown RBP13.15□□□□□ -0.3
SRRT-213ENST00000611405 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 TFR2Q9UP52 801 aa13.15□□□□□ -0.3
SRRT-213ENST00000611405 AKR1B10O60218 316 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
SRRT-213ENST00000611405 NR2F2P24468 414 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 BAG6P46379 1132 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 CASP5P51878 434 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
SRRT-213ENST00000611405 RUSC1Q9BVN2 902 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 IFIH1Q9BYX4 1025 aaKnown RBP13.14□□□□□ -0.31
SRRT-213ENST00000611405 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 SAR1BQ9Y6B6 198 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 SLITRK3O94933 977 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 TUBBP07437 444 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 ERCC3P19447 782 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 PTGER2P43116 358 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 CCDC155Q8N6L0 562 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
SRRT-213ENST00000611405 WNT10BO00744 389 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 GAS7O60861 476 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 NOL4O94818 638 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 ATP1A1P05023 1023 aaKnown RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 EPS15P42566 896 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 RAB21Q9UL25 225 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 MYBP10242 640 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 HOXD13P35453 343 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 TPH2Q8IWU9 490 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
SRRT-213ENST00000611405 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.13□□□□□ -0.31
SRRT-213ENST00000611405 TACC1O75410 805 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 SERPING1P05155 500 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ICAM1P05362 532 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 GABPB1Q06547 395 aaPredicted RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 EPHA7Q15375 998 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 TRIM58Q8NG06 486 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ARMCX3Q9UH62 379 aaPredicted RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ENC1O14682 589 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 EIF3DO15371 548 aaKnown RBP eCLIP13.12□□□□□ -0.313e-6■□□□□ 11.2
SRRT-213ENST00000611405 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 PJA2O43164 708 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 SEC31AO94979 1220 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 FAM13AO94988 1023 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 MAGEA1P43355 309 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 HSD17B4P51659 736 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 HNRNPLLQ8WVV9 542 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 TEKT3Q9BXF9 490 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 DUSP10Q9Y6W6 482 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 CHMP2AO43633 222 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 GCNT3O95395 438 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
SRRT-213ENST00000611405 TGFB2P61812 414 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 TNIP1Q15025 636 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 HDAC6Q9UBN7 1215 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
SRRT-213ENST00000611405 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
SRRT-213ENST00000611405 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
SRRT-213ENST00000611405 NR3C1P04150 777 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 INPP5BP32019 993 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 UBXN2AP68543 259 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms